Analysis of interatomic Contacts of Structural Units in PDB entry:
1L0B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1L0B entry

There is 1 chain in PDB entry 1L0B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 1591GLN 1801
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 1L0B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1604 1618Right-handed alpha
Helix 2
2
A
1646 1655Right-handed alpha
Helix 3
3
A
1662 1670Right-handed alpha
Helix 4
4
A
1677 1681Right-handed 310
Helix 5
5
A
1693 1702Right-handed alpha
Helix 6
6
A
1721 1732Right-handed alpha
Helix 7
7
A
1742 1746Right-handed 310
Helix 8
8
A
1780 1789Right-handed alpha
Helix 9
9
A
1794 1799Right-handed 310
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There are 3 sheets in PDB entry 1L0B. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1621 1622first strand
Strand 2
A
1597 1601parallel
Strand 3
A
1632 1635parallel
Strand 4
A
1658 1661parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1642 1643first strand
Strand 2
A
1684 1685parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1735 1737first strand
Strand 2
A
1710 1713parallel
Strand 3
A
1752 1755parallel
Strand 4
A
1777 1779parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il