Analysis of interatomic Contacts of Structural Units in PDB entry:
1L1E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1L1E entry

There are 2 chains in PDB entry 1L1E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 16LYS 287
B
 TYR 16LYS 287
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 26 helices in PDB entry 1L1E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
19 24Right-handed alpha
Helix 2
2
A
44 59Right-handed alpha
Helix 3
3
A
76 87Right-handed alpha
Helix 4
4
A
96 110Right-handed alpha
Helix 5
5
A
122 126Right-handed 310
Helix 6
6
A
138 142Right-handed 310
Helix 7
7
A
143 145Right-handed 310
Helix 8
8
A
146 158Right-handed alpha
Helix 9
9
A
188 199Right-handed alpha
Helix 10
10
A
207 217Right-handed alpha
Helix 11
11
A
228 246Right-handed alpha
Helix 12
12
A
246 254Right-handed alpha
Helix 13
13
A
255 275Right-handed alpha
Helix 14
14
B
19 24Right-handed alpha
Helix 15
15
B
44 59Right-handed alpha
Helix 16
16
B
76 87Right-handed alpha
Helix 17
17
B
96 108Right-handed alpha
Helix 18
18
B
122 126Right-handed 310
Helix 19
19
B
138 143Right-handed alpha
Helix 20
20
B
146 155Right-handed alpha
Helix 21
21
B
191 199Right-handed alpha
Helix 22
22
B
207 218Right-handed alpha
Helix 23
23
B
228 246Right-handed alpha
Helix 24
24
B
246 254Right-handed alpha
Helix 25
25
B
255 270Right-handed alpha
Helix 26
26
B
271 273Right-handed 310
Back to top of page

There is 1 sheet ( A) in PDB entry 1L1E.

There are 14 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
116 120first strand
Strand 2
A
89 94parallel
Strand 3
A
67 71parallel
Strand 4
A
132 136parallel
Strand 5
A
163 170parallel
Strand 6
A
279 286anti-parallel
Strand 7
A
221 227anti-parallel
Strand 8
B
221 227anti-parallel
Strand 9
B
279 286anti-parallel
Strand 10
B
163 170anti-parallel
Strand 11
B
132 136parallel
Strand 12
B
67 71parallel
Strand 13
B
89 93parallel
Strand 14
B
116 119parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il