Analysis of interatomic Contacts of Structural Units in PDB entry:
1L1L

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 1L1L entry

There are 4 chains in PDB entry 1L1L (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 4	GLU 724
B	GLU 4	GLU 724
C	GLU 4	GLU 724
D	GLU 4	GLU 724

There are133 helices in PDB entry 1L1L. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	8	19	Right-handed alpha
Helix 2	2	A	26	33	Right-handed alpha
Helix 3	3	A	47	61	Right-handed alpha
Helix 4	4	A	62	68	Right-handed 310
Helix 5	5	A	71	91	Right-handed alpha
Helix 6	6	A	97	104	Right-handed alpha
Helix 7	7	A	106	111	Right-handed alpha
Helix 8	8	A	147	159	Right-handed alpha
Helix 9	9	A	168	173	Right-handed alpha
Helix 10	10	A	194	201	Right-handed alpha
Helix 11	11	A	223	237	Right-handed alpha
Helix 12	12	A	238	243	Right-handed 310
Helix 13	13	A	274	290	Right-handed alpha
Helix 14	14	A	297	314	Right-handed alpha
Helix 15	15	A	330	336	Right-handed alpha
Helix 16	16	A	339	346	Right-handed alpha
Helix 17	17	A	362	374	Right-handed alpha
Helix 18	18	A	381	387	Right-handed alpha
Helix 19	19	A	389	393	Right-handed 310
Helix 20	20	A	425	432	Right-handed alpha
Helix 21	21	A	435	451	Right-handed alpha
Helix 22	22	A	457	468	Right-handed alpha
Helix 23	23	A	476	486	Right-handed alpha
Helix 24	24	A	511	537	Right-handed alpha
Helix 25	25	A	550	558	Right-handed alpha
Helix 26	26	A	582	590	Right-handed alpha
Helix 27	27	A	627	642	Right-handed alpha
Helix 28	28	A	654	659	Right-handed 310
Helix 29	29	A	660	668	Right-handed alpha
Helix 30	30	A	694	705	Right-handed alpha
Helix 31	31	A	708	720	Right-handed alpha
Helix 32	32	B	8	19	Right-handed alpha
Helix 33	33	B	26	35	Right-handed alpha
Helix 34	34	B	39	43	Right-handed 310
Helix 35	35	B	47	61	Right-handed alpha
Helix 36	36	B	62	68	Right-handed 310
Helix 37	37	B	71	91	Right-handed alpha
Helix 38	38	B	97	104	Right-handed alpha
Helix 39	39	B	106	112	Right-handed alpha
Helix 40	40	B	147	159	Right-handed alpha
Helix 41	41	B	168	173	Right-handed alpha
Helix 42	42	B	194	201	Right-handed alpha
Helix 43	43	B	205	209	Right-handed 310
Helix 44	44	B	223	237	Right-handed alpha
Helix 45	45	B	238	243	Right-handed 310
Helix 46	46	B	274	290	Right-handed alpha
Helix 47	47	B	297	314	Right-handed alpha
Helix 48	48	B	330	336	Right-handed alpha
Helix 49	49	B	339	346	Right-handed alpha
Helix 50	50	B	362	374	Right-handed alpha
Helix 51	51	B	381	387	Right-handed alpha
Helix 52	52	B	389	393	Right-handed 310
Helix 53	53	B	425	432	Right-handed alpha
Helix 54	54	B	435	451	Right-handed alpha
Helix 55	55	B	457	468	Right-handed alpha
Helix 56	56	B	476	485	Right-handed alpha
Helix 57	57	B	511	537	Right-handed alpha
Helix 58	58	B	550	558	Right-handed alpha
Helix 59	59	B	582	591	Right-handed alpha
Helix 60	60	B	622	626	Right-handed 310
Helix 61	61	B	627	642	Right-handed alpha
Helix 62	62	B	654	659	Right-handed 310
Helix 63	63	B	660	668	Right-handed alpha
Helix 64	64	B	694	704	Right-handed alpha
Helix 65	65	B	708	720	Right-handed alpha
Helix 66	66	C	8	19	Right-handed alpha
Helix 67	67	C	26	35	Right-handed alpha
Helix 68	68	C	47	61	Right-handed alpha
Helix 69	69	C	62	68	Right-handed 310
Helix 70	70	C	71	91	Right-handed alpha
Helix 71	71	C	97	104	Right-handed alpha
Helix 72	72	C	106	111	Right-handed alpha
Helix 73	73	C	147	159	Right-handed alpha
Helix 74	74	C	168	173	Right-handed alpha
Helix 75	75	C	194	201	Right-handed alpha
Helix 76	76	C	207	209	Right-handed 310
Helix 77	77	C	223	237	Right-handed alpha
Helix 78	78	C	238	243	Right-handed 310
Helix 79	79	C	274	290	Right-handed alpha
Helix 80	80	C	297	314	Right-handed alpha
Helix 81	81	C	330	335	Right-handed alpha
Helix 82	82	C	336	338	Right-handed 310
Helix 83	83	C	339	346	Right-handed alpha
Helix 84	84	C	347	350	Right-handed 310
Helix 85	85	C	363	374	Right-handed alpha
Helix 86	86	C	381	387	Right-handed alpha
Helix 87	87	C	389	393	Right-handed 310
Helix 88	88	C	425	432	Right-handed alpha
Helix 89	89	C	435	451	Right-handed alpha
Helix 90	90	C	457	468	Right-handed alpha
Helix 91	91	C	476	486	Right-handed alpha
Helix 92	92	C	511	537	Right-handed alpha
Helix 93	93	C	550	558	Right-handed alpha
Helix 94	94	C	583	590	Right-handed alpha
Helix 95	95	C	622	626	Right-handed 310
Helix 96	96	C	627	642	Right-handed alpha
Helix 97	97	C	654	659	Right-handed 310
Helix 98	98	C	660	668	Right-handed alpha
Helix 99	99	C	694	705	Right-handed alpha
Helix 100	100	C	708	720	Right-handed alpha
Helix 101	101	D	8	17	Right-handed alpha
Helix 102	102	D	26	33	Right-handed alpha
Helix 103	103	D	47	61	Right-handed alpha
Helix 104	104	D	62	67	Right-handed 310
Helix 105	105	D	71	91	Right-handed alpha
Helix 106	106	D	97	104	Right-handed alpha
Helix 107	107	D	106	112	Right-handed alpha
Helix 108	108	D	147	159	Right-handed alpha
Helix 109	109	D	168	173	Right-handed alpha
Helix 110	110	D	194	201	Right-handed alpha
Helix 111	111	D	223	237	Right-handed alpha
Helix 112	112	D	238	243	Right-handed 310
Helix 113	113	D	274	290	Right-handed alpha
Helix 114	114	D	297	314	Right-handed alpha
Helix 115	115	D	330	335	Right-handed alpha
Helix 116	116	D	336	338	Right-handed 310
Helix 117	117	D	339	346	Right-handed alpha
Helix 118	118	D	362	371	Right-handed alpha
Helix 119	119	D	381	387	Right-handed alpha
Helix 120	120	D	389	393	Right-handed 310
Helix 121	121	D	425	432	Right-handed alpha
Helix 122	122	D	435	451	Right-handed alpha
Helix 123	123	D	457	468	Right-handed alpha
Helix 124	124	D	476	486	Right-handed alpha
Helix 125	125	D	511	537	Right-handed alpha
Helix 126	126	D	550	558	Right-handed alpha
Helix 127	127	D	582	590	Right-handed alpha
Helix 128	128	D	622	626	Right-handed 310
Helix 129	129	D	627	642	Right-handed alpha
Helix 130	130	D	654	659	Right-handed 310
Helix 131	131	D	660	668	Right-handed alpha
Helix 132	132	D	694	705	Right-handed alpha
Helix 133	133	D	708	720	Right-handed alpha

There are 33 sheets in PDB entry 1L1L. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	38	39	first strand
Strand 2	A	44	45	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	94	96	first strand
Strand 2	A	421	424	anti-parallel
Strand 3	A	471	474	parallel
Strand 4	A	545	546	parallel

Back to list of sheets
Back to top of page

There are 7 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	119	123	first strand
Strand 2	A	162	166	parallel
Strand 3	A	322	327	parallel
Strand 4	A	350	356	parallel
Strand 5	A	377	380	parallel
Strand 6	A	674	679	anti-parallel
Strand 7	A	650	653	parallel

Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	127	128	first strand
Strand 2	A	144	145	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	183	187	first strand
Strand 2	A	249	253	parallel
Strand 3	A	216	219	parallel

Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	402	405	first strand
Strand 2	A	412	414	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	490	497	first strand
Strand 2	A	504	510	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	593	596	first strand
Strand 2	A	603	611	anti-parallel
Strand 3	A	570	578	anti-parallel
Strand 4	A	690	692	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	94	96	first strand
Strand 2	B	421	424	anti-parallel
Strand 3	B	471	474	parallel
Strand 4	B	545	546	parallel

Back to list of sheets
Back to top of page

There are 6 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	119	123	first strand
Strand 2	B	162	166	parallel
Strand 3	B	322	327	parallel
Strand 4	B	350	356	parallel
Strand 5	B	377	380	parallel
Strand 6	B	674	675	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	127	128	first strand
Strand 2	B	144	145	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	183	187	first strand
Strand 2	B	249	253	parallel
Strand 3	B	216	219	parallel

Back to list of sheets
Back to top of page

There are 2 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	402	405	first strand
Strand 2	B	412	414	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	490	497	first strand
Strand 2	B	504	510	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	593	596	first strand
Strand 2	B	603	611	anti-parallel
Strand 3	B	570	578	anti-parallel
Strand 4	B	690	692	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	651	653	first strand
Strand 2	B	677	679	parallel

Back to list of sheets
Back to top of page

There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	38	39	first strand
Strand 2	C	44	45	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	94	96	first strand
Strand 2	C	421	424	anti-parallel
Strand 3	C	471	474	parallel
Strand 4	C	545	546	parallel

Back to list of sheets
Back to top of page

There are 6 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	119	123	first strand
Strand 2	C	162	166	parallel
Strand 3	C	322	327	parallel
Strand 4	C	351	356	parallel
Strand 5	C	377	380	parallel
Strand 6	C	674	675	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	127	128	first strand
Strand 2	C	144	145	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	204	205	first strand
Strand 2	C	183	188	parallel
Strand 3	C	249	253	parallel
Strand 4	C	216	219	parallel

Back to list of sheets
Back to top of page

There are 2 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	402	405	first strand
Strand 2	C	412	414	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	490	497	first strand
Strand 2	C	504	510	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	593	596	first strand
Strand 2	C	603	611	anti-parallel
Strand 3	C	570	578	anti-parallel
Strand 4	C	690	692	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	651	653	first strand
Strand 2	C	677	679	parallel

Back to list of sheets
Back to top of page

There are 2 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	38	39	first strand
Strand 2	D	44	45	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	94	96	first strand
Strand 2	D	421	424	anti-parallel
Strand 3	D	471	474	parallel
Strand 4	D	545	546	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	119	123	first strand
Strand 2	D	162	166	parallel
Strand 3	D	322	327	parallel
Strand 4	D	350	356	parallel
Strand 5	D	377	380	parallel
Strand 6	D	674	679	anti-parallel
Strand 7	D	650	653	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	127	128	first strand
Strand 2	D	144	145	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	183	187	first strand
Strand 2	D	249	253	parallel
Strand 3	D	216	219	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	402	405	first strand
Strand 2	D	412	414	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	490	497	first strand
Strand 2	D	504	510	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	594	596	first strand
Strand 2	D	603	611	anti-parallel
Strand 3	D	570	578	anti-parallel
Strand 4	D	690	692	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 1L1L

Analysis of interatomic Contacts of Structural Units in PDB entry:
1L1L