Analysis of interatomic Contacts of Structural Units in PDB entry:
1L5H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1L5H entry

There are 2 chains in PDB entry 1L5H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 49GLU 480
B
 SER 2ARG 523
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 47 helices in PDB entry 1L5H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
62 68Right-handed alpha
Helix 2
2
A
86 93Right-handed alpha
Helix 3
3
A
119 126Right-handed alpha
Helix 4
4
A
127 142Right-handed alpha
Helix 5
5
A
153 159Right-handed alpha
Helix 6
6
A
162 175Right-handed alpha
Helix 7
7
A
190 206Right-handed alpha
Helix 8
8
A
230 232Right-handed 310
Helix 9
9
A
233 245Right-handed alpha
Helix 10
10
A
258 265Right-handed alpha
Helix 11
11
A
266 268Right-handed 310
Helix 12
12
A
275 290Right-handed alpha
Helix 13
13
A
301 315Right-handed alpha
Helix 14
14
A
318 347Right-handed alpha
Helix 15
15
A
365 370Right-handed alpha
Helix 16
16
A
409 417Right-handed alpha
Helix 17
17
A
427 434Right-handed alpha
Helix 18
18
A
451 469Right-handed alpha
Helix 19
19
A
470 474Right-handed 310
Helix 20
20
B
10 15Right-handed alpha
Helix 21
21
B
17 32Right-handed alpha
Helix 22
22
B
36 47Right-handed alpha
Helix 23
23
B
49 58Right-handed alpha
Helix 24
24
B
70 80Right-handed alpha
Helix 25
25
B
92 108Right-handed alpha
Helix 26
26
B
121 126Right-handed alpha
Helix 27
27
B
127 142Right-handed alpha
Helix 28
28
B
152 159Right-handed alpha
Helix 29
29
B
161 172Right-handed alpha
Helix 30
30
B
192 210Right-handed alpha
Helix 31
31
B
212 216Right-handed 310
Helix 32
32
B
233 245Right-handed alpha
Helix 33
33
B
259 263Right-handed 310
Helix 34
34
B
277 283Right-handed alpha
Helix 35
35
B
284 287Right-handed 310
Helix 36
36
B
294 297Right-handed 310
Helix 37
37
B
298 307Right-handed alpha
Helix 38
38
B
320 337Right-handed alpha
Helix 39
39
B
341 363Right-handed alpha
Helix 40
40
B
372 386Right-handed alpha
Helix 41
41
B
399 412Right-handed alpha
Helix 42
42
B
426 437Right-handed alpha
Helix 43
43
B
445 447Right-handed 310
Helix 44
44
B
448 459Right-handed alpha
Helix 45
45
B
478 482Right-handed 310
Helix 46
46
B
485 509Right-handed alpha
Helix 47
47
B
515 519Right-handed 310
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There are 6 sheets in PDB entry 1L5H. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
178 181first strand
Strand 2
A
148 152parallel
Strand 3
A
79 83parallel
Strand 4
A
114 115parallel
Strand 5
B
63 64anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
248 253first strand
Strand 2
A
222 226parallel
Strand 3
A
270 273parallel
Strand 4
A
294 296parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
373 375first strand
Strand 2
A
350 352parallel
Strand 3
A
420 421parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
114 115first strand
Strand 2
B
88 90parallel
Strand 3
B
149 151parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
251 253first strand
Strand 2
B
224 227parallel
Strand 3
B
289 292parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
420 423first strand
Strand 2
B
389 395parallel
Strand 3
B
366 370parallel
Strand 4
B
441 444parallel
Strand 5
B
466 468parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il