Analysis of interatomic Contacts of Structural Units in PDB entry:
1L5Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1L5Q entry

There are 2 chains in PDB entry 1L5Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 22SER 830
B
 ASN 23SER 830
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 84 helices in PDB entry 1L5Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
23 38Right-handed alpha
Helix 2
2
A
47 62Right-handed alpha
Helix 3
3
A
63 78Right-handed alpha
Helix 4
4
A
94 102Right-handed alpha
Helix 5
5
A
104 115Right-handed alpha
Helix 6
6
A
118 126Right-handed alpha
Helix 7
7
A
134 150Right-handed alpha
Helix 8
8
A
194 197Right-handed 310
Helix 9
9
A
261 268Right-handed alpha
Helix 10
10
A
268 274Right-handed alpha
Helix 11
11
A
275 277Right-handed 310
Helix 12
12
A
289 314Right-handed alpha
Helix 13
13
A
328 332Right-handed alpha
Helix 14
14
A
344 356Right-handed alpha
Helix 15
15
A
360 371Right-handed alpha
Helix 16
16
A
380 384Right-handed 310
Helix 17
17
A
389 396Right-handed alpha
Helix 18
18
A
396 418Right-handed alpha
Helix 19
19
A
421 429Right-handed alpha
Helix 20
20
A
441 448Right-handed alpha
Helix 21
21
A
456 466Right-handed alpha
Helix 22
22
A
468 475Right-handed alpha
Helix 23
23
A
496 508Right-handed alpha
Helix 24
24
A
509 513Right-handed 310
Helix 25
25
A
514 525Right-handed 310
Helix 26
26
A
527 553Right-handed alpha
Helix 27
27
A
575 593Right-handed alpha
Helix 28
28
A
613 633Right-handed alpha
Helix 29
29
A
636 638Right-handed 310
Helix 30
30
A
649 657Right-handed alpha
Helix 31
31
A
658 660Right-handed 310
Helix 32
32
A
676 684Right-handed alpha
Helix 33
33
A
695 704Right-handed alpha
Helix 34
34
A
705 708Right-handed 310
Helix 35
35
A
714 725Right-handed alpha
Helix 36
36
A
727 735Right-handed alpha
Helix 37
37
A
735 748Right-handed alpha
Helix 38
38
A
758 768Right-handed alpha
Helix 39
39
A
772 792Right-handed alpha
Helix 40
40
A
793 807Right-handed alpha
Helix 41
41
A
808 811Right-handed 310
Helix 42
42
A
812 824Right-handed alpha
Helix 43
43
B
23 38Right-handed alpha
Helix 44
44
B
47 61Right-handed alpha
Helix 45
45
B
63 78Right-handed alpha
Helix 46
46
B
94 102Right-handed alpha
Helix 47
47
B
104 115Right-handed alpha
Helix 48
48
B
118 124Right-handed alpha
Helix 49
49
B
134 150Right-handed alpha
Helix 50
50
B
194 197Right-handed 310
Helix 51
51
B
261 268Right-handed alpha
Helix 52
52
B
268 274Right-handed alpha
Helix 53
53
B
275 277Right-handed 310
Helix 54
54
B
289 314Right-handed alpha
Helix 55
55
B
328 332Right-handed alpha
Helix 56
56
B
344 356Right-handed alpha
Helix 57
57
B
360 371Right-handed alpha
Helix 58
58
B
380 384Right-handed 310
Helix 59
59
B
389 396Right-handed alpha
Helix 60
60
B
396 418Right-handed alpha
Helix 61
61
B
421 429Right-handed alpha
Helix 62
62
B
441 448Right-handed alpha
Helix 63
63
B
456 466Right-handed alpha
Helix 64
64
B
468 475Right-handed alpha
Helix 65
65
B
496 508Right-handed alpha
Helix 66
66
B
509 513Right-handed 310
Helix 67
67
B
514 525Right-handed 310
Helix 68
68
B
527 553Right-handed alpha
Helix 69
69
B
575 593Right-handed alpha
Helix 70
70
B
613 633Right-handed alpha
Helix 71
71
B
636 638Right-handed 310
Helix 72
72
B
649 657Right-handed alpha
Helix 73
73
B
658 660Right-handed 310
Helix 74
74
B
676 684Right-handed alpha
Helix 75
75
B
695 704Right-handed alpha
Helix 76
76
B
705 708Right-handed 310
Helix 77
77
B
714 725Right-handed alpha
Helix 78
78
B
727 735Right-handed alpha
Helix 79
79
B
735 747Right-handed alpha
Helix 80
80
B
758 768Right-handed alpha
Helix 81
81
B
772 792Right-handed alpha
Helix 82
82
B
793 807Right-handed alpha
Helix 83
83
B
808 811Right-handed 310
Helix 84
84
B
812 824Right-handed alpha
Back to top of page

There are 12 sheets in PDB entry 1L5Q. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
198 209first strand
Strand 2
A
212 231anti-parallel
Strand 3
A
191 192anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
198 209first strand
Strand 2
A
212 231anti-parallel
Strand 3
A
238 247anti-parallel
Strand 4
A
154 159parallel
Strand 5
A
81 85parallel
Strand 6
A
333 338parallel
Strand 7
A
372 375parallel
Strand 8
A
451 454parallel
Strand 9
A
479 481parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
89 92first strand
Strand 2
A
129 131anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
167 171first strand
Strand 2
A
174 178anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
386 388first strand
Strand 2
A
438 440anti-parallel
Strand 3
A
431 432anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
640 645first strand
Strand 2
A
601 606parallel
Strand 3
A
562 567parallel
Strand 4
A
662 665parallel
Strand 5
A
687 690parallel
Strand 6
A
709 710parallel
Back to list of sheets
Back to top of page

There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
198 209first strand
Strand 2
B
212 231anti-parallel
Strand 3
B
191 192anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
198 209first strand
Strand 2
B
212 231anti-parallel
Strand 3
B
238 247anti-parallel
Strand 4
B
154 159parallel
Strand 5
B
81 85parallel
Strand 6
B
333 338parallel
Strand 7
B
372 375parallel
Strand 8
B
451 454parallel
Strand 9
B
479 481parallel
Back to list of sheets
Back to top of page

There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
89 92first strand
Strand 2
B
129 131anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
167 171first strand
Strand 2
B
174 178anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
386 388first strand
Strand 2
B
438 440anti-parallel
Strand 3
B
431 432anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
640 645first strand
Strand 2
B
601 606parallel
Strand 3
B
562 567parallel
Strand 4
B
662 665parallel
Strand 5
B
687 690parallel
Strand 6
B
709 710parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il