Analysis of interatomic Contacts of Structural Units in PDB entry:
1L6I

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 1L6I entry

There are 2 chains in PDB entry 1L6I (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 1	ARG 796
B	SER 1	ARG 796

There are 92 helices in PDB entry 1L6I. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	6	21	Right-handed alpha
Helix 2	2	A	25	29	Right-handed 310
Helix 3	3	A	30	48	Right-handed alpha
Helix 4	4	A	73	82	Right-handed alpha
Helix 5	5	A	83	93	Right-handed alpha
Helix 6	6	A	97	103	Right-handed alpha
Helix 7	7	A	113	129	Right-handed alpha
Helix 8	8	A	162	166	Right-handed 310
Helix 9	9	A	173	176	Right-handed 310
Helix 10	10	A	229	235	Right-handed alpha
Helix 11	11	A	239	241	Right-handed 310
Helix 12	12	A	242	250	Right-handed alpha
Helix 13	13	A	251	253	Right-handed 310
Helix 14	14	A	261	290	Right-handed alpha
Helix 15	15	A	293	295	Right-handed 310
Helix 16	16	A	296	300	Right-handed alpha
Helix 17	17	A	312	324	Right-handed alpha
Helix 18	18	A	328	337	Right-handed alpha
Helix 19	19	A	348	352	Right-handed 310
Helix 20	20	A	357	364	Right-handed alpha
Helix 21	21	A	364	386	Right-handed alpha
Helix 22	22	A	389	397	Right-handed alpha
Helix 23	23	A	406	414	Right-handed alpha
Helix 24	24	A	421	432	Right-handed alpha
Helix 25	25	A	433	440	Right-handed alpha
Helix 26	26	A	452	457	Right-handed alpha
Helix 27	27	A	461	472	Right-handed alpha
Helix 28	28	A	479	491	Right-handed 310
Helix 29	29	A	492	519	Right-handed alpha
Helix 30	30	A	536	539	Right-handed 310
Helix 31	31	A	540	557	Right-handed alpha
Helix 32	32	A	578	597	Right-handed alpha
Helix 33	33	A	601	603	Right-handed 310
Helix 34	34	A	614	622	Right-handed alpha
Helix 35	35	A	623	625	Right-handed 310
Helix 36	36	A	641	649	Right-handed alpha
Helix 37	37	A	658	669	Right-handed alpha
Helix 38	38	A	670	673	Right-handed 310
Helix 39	39	A	679	690	Right-handed alpha
Helix 40	40	A	692	700	Right-handed alpha
Helix 41	41	A	700	712	Right-handed alpha
Helix 42	42	A	723	731	Right-handed alpha
Helix 43	43	A	739	760	Right-handed alpha
Helix 44	44	A	760	775	Right-handed alpha
Helix 45	45	A	776	778	Right-handed 310
Helix 46	46	A	779	791	Right-handed alpha
Helix 47	47	B	6	21	Right-handed alpha
Helix 48	48	B	25	29	Right-handed 310
Helix 49	49	B	30	48	Right-handed alpha
Helix 50	50	B	73	82	Right-handed alpha
Helix 51	51	B	83	93	Right-handed alpha
Helix 52	52	B	97	103	Right-handed alpha
Helix 53	53	B	113	129	Right-handed alpha
Helix 54	54	B	162	166	Right-handed 310
Helix 55	55	B	173	176	Right-handed 310
Helix 56	56	B	229	235	Right-handed alpha
Helix 57	57	B	239	241	Right-handed 310
Helix 58	58	B	242	250	Right-handed alpha
Helix 59	59	B	251	253	Right-handed 310
Helix 60	60	B	261	290	Right-handed alpha
Helix 61	61	B	293	295	Right-handed 310
Helix 62	62	B	296	300	Right-handed alpha
Helix 63	63	B	312	324	Right-handed alpha
Helix 64	64	B	328	337	Right-handed alpha
Helix 65	65	B	348	352	Right-handed 310
Helix 66	66	B	357	364	Right-handed alpha
Helix 67	67	B	364	386	Right-handed alpha
Helix 68	68	B	389	397	Right-handed alpha
Helix 69	69	B	406	414	Right-handed alpha
Helix 70	70	B	421	431	Right-handed alpha
Helix 71	71	B	433	440	Right-handed alpha
Helix 72	72	B	452	457	Right-handed alpha
Helix 73	73	B	461	472	Right-handed alpha
Helix 74	74	B	479	491	Right-handed 310
Helix 75	75	B	492	519	Right-handed alpha
Helix 76	76	B	536	539	Right-handed 310
Helix 77	77	B	540	557	Right-handed alpha
Helix 78	78	B	578	598	Right-handed alpha
Helix 79	79	B	601	603	Right-handed 310
Helix 80	80	B	614	622	Right-handed alpha
Helix 81	81	B	623	625	Right-handed 310
Helix 82	82	B	641	649	Right-handed alpha
Helix 83	83	B	658	669	Right-handed alpha
Helix 84	84	B	670	673	Right-handed 310
Helix 85	85	B	679	690	Right-handed alpha
Helix 86	86	B	692	700	Right-handed alpha
Helix 87	87	B	700	712	Right-handed alpha
Helix 88	88	B	723	731	Right-handed alpha
Helix 89	89	B	739	760	Right-handed alpha
Helix 90	90	B	760	775	Right-handed alpha
Helix 91	91	B	776	778	Right-handed 310
Helix 92	92	B	779	791	Right-handed alpha

There are 12 sheets in PDB entry 1L6I. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	444	446	first strand
Strand 2	A	416	419	parallel
Strand 3	A	340	343	parallel
Strand 4	A	301	306	parallel
Strand 5	A	60	64	parallel
Strand 6	A	133	138	parallel
Strand 7	A	214	223	parallel
Strand 8	A	195	207	anti-parallel
Strand 9	A	170	171	anti-parallel

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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	444	446	first strand
Strand 2	A	416	419	parallel
Strand 3	A	340	343	parallel
Strand 4	A	301	306	parallel
Strand 5	A	60	64	parallel
Strand 6	A	133	138	parallel
Strand 7	A	214	223	parallel
Strand 8	A	195	207	anti-parallel
Strand 9	A	177	181	anti-parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	146	150	first strand
Strand 2	A	153	157	anti-parallel

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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	184	185	first strand
Strand 2	A	191	192	anti-parallel

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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	354	356	first strand
Strand 2	A	403	405	anti-parallel
Strand 3	A	399	400	anti-parallel

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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	605	609	first strand
Strand 2	A	566	571	parallel
Strand 3	A	527	532	parallel
Strand 4	A	627	630	parallel
Strand 5	A	652	655	parallel
Strand 6	A	674	675	parallel

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There are 9 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	444	446	first strand
Strand 2	B	417	419	parallel
Strand 3	B	340	343	parallel
Strand 4	B	301	306	parallel
Strand 5	B	60	64	parallel
Strand 6	B	133	138	parallel
Strand 7	B	214	223	parallel
Strand 8	B	195	207	anti-parallel
Strand 9	B	170	171	anti-parallel

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There are 9 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	444	446	first strand
Strand 2	B	417	419	parallel
Strand 3	B	340	343	parallel
Strand 4	B	301	306	parallel
Strand 5	B	60	64	parallel
Strand 6	B	133	138	parallel
Strand 7	B	214	223	parallel
Strand 8	B	195	207	anti-parallel
Strand 9	B	177	181	anti-parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	146	150	first strand
Strand 2	B	153	157	anti-parallel

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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	184	185	first strand
Strand 2	B	191	192	anti-parallel

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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	354	356	first strand
Strand 2	B	403	405	anti-parallel
Strand 3	B	399	400	anti-parallel

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There are 6 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	605	610	first strand
Strand 2	B	566	571	parallel
Strand 3	B	527	532	parallel
Strand 4	B	627	630	parallel
Strand 5	B	652	655	parallel
Strand 6	B	674	675	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 1L6I

Analysis of interatomic Contacts of Structural Units in PDB entry:
1L6I