Analysis of interatomic Contacts of Structural Units in PDB entry:
1L6W

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 1L6W entry

There are 10 chains in PDB entry 1L6W (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	ILE 220
B	MET 1	ILE 220
C	MET 1	ILE 220
D	MET 1	ILE 220
E	MET 1	ILE 220
F	MET 1	ILE 220
G	MET 1	ILE 220
H	MET 1	ILE 220
I	MET 1	ILE 220
J	MET 1	ILE 220

There are110 helices in PDB entry 1L6W. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	9	18	Right-handed alpha
Helix 2	2	A	28	36	Right-handed alpha
Helix 3	3	A	38	50	Right-handed alpha
Helix 4	4	A	64	79	Right-handed alpha
Helix 5	5	A	89	103	Right-handed alpha
Helix 6	6	A	113	124	Right-handed alpha
Helix 7	7	A	131	138	Right-handed alpha
Helix 8	8	A	141	157	Right-handed alpha
Helix 9	9	A	169	179	Right-handed alpha
Helix 10	10	A	187	194	Right-handed alpha
Helix 11	11	A	197	216	Right-handed alpha
Helix 12	12	B	9	18	Right-handed alpha
Helix 13	13	B	28	36	Right-handed alpha
Helix 14	14	B	38	50	Right-handed alpha
Helix 15	15	B	64	79	Right-handed alpha
Helix 16	16	B	89	103	Right-handed alpha
Helix 17	17	B	113	123	Right-handed alpha
Helix 18	18	B	131	138	Right-handed alpha
Helix 19	19	B	141	157	Right-handed alpha
Helix 20	20	B	169	179	Right-handed alpha
Helix 21	21	B	187	194	Right-handed alpha
Helix 22	22	B	197	216	Right-handed alpha
Helix 23	23	C	9	17	Right-handed alpha
Helix 24	24	C	28	36	Right-handed alpha
Helix 25	25	C	38	50	Right-handed alpha
Helix 26	26	C	64	79	Right-handed alpha
Helix 27	27	C	89	103	Right-handed alpha
Helix 28	28	C	113	124	Right-handed alpha
Helix 29	29	C	131	138	Right-handed alpha
Helix 30	30	C	141	157	Right-handed alpha
Helix 31	31	C	169	179	Right-handed alpha
Helix 32	32	C	187	194	Right-handed alpha
Helix 33	33	C	197	216	Right-handed alpha
Helix 34	34	D	9	17	Right-handed alpha
Helix 35	35	D	28	36	Right-handed alpha
Helix 36	36	D	38	50	Right-handed alpha
Helix 37	37	D	64	79	Right-handed alpha
Helix 38	38	D	89	102	Right-handed alpha
Helix 39	39	D	113	124	Right-handed alpha
Helix 40	40	D	131	138	Right-handed alpha
Helix 41	41	D	141	157	Right-handed alpha
Helix 42	42	D	169	179	Right-handed alpha
Helix 43	43	D	187	194	Right-handed alpha
Helix 44	44	D	197	216	Right-handed alpha
Helix 45	45	E	9	17	Right-handed alpha
Helix 46	46	E	28	36	Right-handed alpha
Helix 47	47	E	38	50	Right-handed alpha
Helix 48	48	E	64	79	Right-handed alpha
Helix 49	49	E	89	103	Right-handed alpha
Helix 50	50	E	113	124	Right-handed alpha
Helix 51	51	E	131	138	Right-handed alpha
Helix 52	52	E	141	157	Right-handed alpha
Helix 53	53	E	169	179	Right-handed alpha
Helix 54	54	E	187	194	Right-handed alpha
Helix 55	55	E	197	216	Right-handed alpha
Helix 56	56	F	9	17	Right-handed alpha
Helix 57	57	F	28	36	Right-handed alpha
Helix 58	58	F	38	50	Right-handed alpha
Helix 59	59	F	64	79	Right-handed alpha
Helix 60	60	F	89	103	Right-handed alpha
Helix 61	61	F	113	124	Right-handed alpha
Helix 62	62	F	131	138	Right-handed alpha
Helix 63	63	F	141	157	Right-handed alpha
Helix 64	64	F	169	179	Right-handed alpha
Helix 65	65	F	187	194	Right-handed alpha
Helix 66	66	F	197	216	Right-handed alpha
Helix 67	67	G	9	17	Right-handed alpha
Helix 68	68	G	28	36	Right-handed alpha
Helix 69	69	G	38	50	Right-handed alpha
Helix 70	70	G	64	79	Right-handed alpha
Helix 71	71	G	89	103	Right-handed alpha
Helix 72	72	G	113	124	Right-handed alpha
Helix 73	73	G	131	138	Right-handed alpha
Helix 74	74	G	141	157	Right-handed alpha
Helix 75	75	G	169	179	Right-handed alpha
Helix 76	76	G	187	194	Right-handed alpha
Helix 77	77	G	197	216	Right-handed alpha
Helix 78	78	H	9	17	Right-handed alpha
Helix 79	79	H	28	36	Right-handed alpha
Helix 80	80	H	38	50	Right-handed alpha
Helix 81	81	H	64	79	Right-handed alpha
Helix 82	82	H	89	102	Right-handed alpha
Helix 83	83	H	113	124	Right-handed alpha
Helix 84	84	H	131	138	Right-handed alpha
Helix 85	85	H	141	157	Right-handed alpha
Helix 86	86	H	169	179	Right-handed alpha
Helix 87	87	H	187	194	Right-handed alpha
Helix 88	88	H	197	216	Right-handed alpha
Helix 89	89	I	9	17	Right-handed alpha
Helix 90	90	I	28	36	Right-handed alpha
Helix 91	91	I	38	50	Right-handed alpha
Helix 92	92	I	64	79	Right-handed alpha
Helix 93	93	I	89	103	Right-handed alpha
Helix 94	94	I	113	124	Right-handed alpha
Helix 95	95	I	131	138	Right-handed alpha
Helix 96	96	I	141	157	Right-handed alpha
Helix 97	97	I	169	179	Right-handed alpha
Helix 98	98	I	187	194	Right-handed alpha
Helix 99	99	I	197	216	Right-handed alpha
Helix 100	100	J	9	17	Right-handed alpha
Helix 101	101	J	28	36	Right-handed alpha
Helix 102	102	J	38	50	Right-handed alpha
Helix 103	103	J	64	79	Right-handed alpha
Helix 104	104	J	89	103	Right-handed alpha
Helix 105	105	J	113	124	Right-handed alpha
Helix 106	106	J	131	138	Right-handed alpha
Helix 107	107	J	141	157	Right-handed alpha
Helix 108	108	J	169	179	Right-handed alpha
Helix 109	109	J	187	194	Right-handed alpha
Helix 110	110	J	197	216	Right-handed alpha

There are 10 sheets in PDB entry 1L6W. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2	6	first strand
Strand 2	A	24	26	parallel
Strand 3	A	55	59	parallel
Strand 4	A	83	87	parallel
Strand 5	A	106	111	parallel
Strand 6	A	127	130	parallel
Strand 7	A	161	164	parallel
Strand 8	A	183	186	parallel
Strand 9	A	2	6	parallel

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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2	6	first strand
Strand 2	B	24	26	parallel
Strand 3	B	55	59	parallel
Strand 4	B	83	87	parallel
Strand 5	B	106	111	parallel
Strand 6	B	127	130	parallel
Strand 7	B	161	164	parallel
Strand 8	B	183	186	parallel
Strand 9	B	2	6	parallel

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There are 9 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2	6	first strand
Strand 2	C	24	26	parallel
Strand 3	C	55	59	parallel
Strand 4	C	83	87	parallel
Strand 5	C	106	111	parallel
Strand 6	C	127	130	parallel
Strand 7	C	161	164	parallel
Strand 8	C	183	186	parallel
Strand 9	C	2	6	parallel

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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	2	6	first strand
Strand 2	D	24	26	parallel
Strand 3	D	55	59	parallel
Strand 4	D	83	87	parallel
Strand 5	D	106	111	parallel
Strand 6	D	127	130	parallel
Strand 7	D	161	164	parallel
Strand 8	D	183	186	parallel
Strand 9	D	2	6	parallel

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There are 9 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	2	6	first strand
Strand 2	E	24	26	parallel
Strand 3	E	55	59	parallel
Strand 4	E	83	87	parallel
Strand 5	E	106	111	parallel
Strand 6	E	127	130	parallel
Strand 7	E	161	164	parallel
Strand 8	E	183	186	parallel
Strand 9	E	2	6	parallel

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There are 9 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	2	6	first strand
Strand 2	F	24	26	parallel
Strand 3	F	55	59	parallel
Strand 4	F	83	87	parallel
Strand 5	F	106	111	parallel
Strand 6	F	127	130	parallel
Strand 7	F	161	164	parallel
Strand 8	F	183	186	parallel
Strand 9	F	2	6	parallel

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There are 9 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	2	6	first strand
Strand 2	G	24	26	parallel
Strand 3	G	55	59	parallel
Strand 4	G	83	87	parallel
Strand 5	G	106	111	parallel
Strand 6	G	127	130	parallel
Strand 7	G	161	164	parallel
Strand 8	G	183	186	parallel
Strand 9	G	2	6	parallel

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There are 9 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	2	6	first strand
Strand 2	H	24	26	parallel
Strand 3	H	55	59	parallel
Strand 4	H	83	87	parallel
Strand 5	H	106	111	parallel
Strand 6	H	127	130	parallel
Strand 7	H	161	164	parallel
Strand 8	H	183	186	parallel
Strand 9	H	2	6	parallel

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There are 9 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	2	6	first strand
Strand 2	I	24	26	parallel
Strand 3	I	55	59	parallel
Strand 4	I	83	87	parallel
Strand 5	I	106	111	parallel
Strand 6	I	127	130	parallel
Strand 7	I	161	164	parallel
Strand 8	I	183	186	parallel
Strand 9	I	2	6	parallel

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There are 9 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	2	6	first strand
Strand 2	J	24	26	parallel
Strand 3	J	55	59	parallel
Strand 4	J	83	87	parallel
Strand 5	J	106	111	parallel
Strand 6	J	127	130	parallel
Strand 7	J	161	164	parallel
Strand 8	J	183	186	parallel
Strand 9	J	2	6	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 1L6W

Analysis of interatomic Contacts of Structural Units in PDB entry:
1L6W