Analysis of interatomic Contacts of Structural Units in PDB entry:
1L8Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1L8Q entry

There is 1 chain in PDB entry 1L8Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 77CYS 399
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 1L8Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
94 107Right-handed alpha
Helix 2
2
A
124 139Right-handed alpha
Helix 3
3
A
148 162Right-handed alpha
Helix 4
4
A
163 173Right-handed alpha
Helix 5
5
A
181 186Right-handed 310
Helix 6
6
A
188 205Right-handed alpha
Helix 7
7
A
216 220Right-handed 310
Helix 8
8
A
224 233Right-handed alpha
Helix 9
9
A
242 257Right-handed alpha
Helix 10
10
A
262 273Right-handed alpha
Helix 11
11
A
275 290Right-handed alpha
Helix 12
12
A
290 317Right-handed alpha
Helix 13
13
A
319 324Right-handed alpha
Helix 14
14
A
332 348Right-handed alpha
Helix 15
15
A
350 358Right-handed alpha
Helix 16
16
A
364 376Right-handed alpha
Helix 17
17
A
382 399Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1L8Q.

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
143 147first strand
Strand 2
A
176 180parallel
Strand 3
A
208 213parallel
Strand 4
A
115 118parallel
Strand 5
A
235 238parallel
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