Analysis of interatomic Contacts of Structural Units in PDB entry:
1L8W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1L8W entry

There are 4 chains in PDB entry 1L8W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 52SER 342
B
 PRO 29LYS 344
C
 GLY 52SER 347
D
 LYS 32ALA 353
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 47 helices in PDB entry 1L8W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
52 59Right-handed alpha
Helix 2
2
A
66 89Right-handed alpha
Helix 3
3
A
113 140Right-handed alpha
Helix 4
4
A
160 179Right-handed alpha
Helix 5
5
A
192 203Right-handed 310
Helix 6
6
A
212 225Right-handed alpha
Helix 7
7
A
227 239Right-handed alpha
Helix 8
8
A
254 261Right-handed alpha
Helix 9
9
A
276 290Right-handed alpha
Helix 10
10
A
301 342Right-handed alpha
Helix 11
11
B
35 54Right-handed alpha
Helix 12
12
B
67 89Right-handed alpha
Helix 13
13
B
114 140Right-handed alpha
Helix 14
14
B
160 178Right-handed alpha
Helix 15
15
B
180 186Right-handed alpha
Helix 16
16
B
195 203Right-handed 310
Helix 17
17
B
212 225Right-handed alpha
Helix 18
18
B
227 241Right-handed alpha
Helix 19
19
B
254 261Right-handed alpha
Helix 20
20
B
276 290Right-handed alpha
Helix 21
21
B
301 343Right-handed alpha
Helix 22
22
C
54 59Right-handed alpha
Helix 23
23
C
66 89Right-handed alpha
Helix 24
24
C
113 140Right-handed alpha
Helix 25
25
C
152 156Right-handed 310
Helix 26
26
C
160 178Right-handed alpha
Helix 27
27
C
180 186Right-handed alpha
Helix 28
28
C
195 203Right-handed 310
Helix 29
29
C
212 225Right-handed alpha
Helix 30
30
C
227 239Right-handed alpha
Helix 31
31
C
254 261Right-handed alpha
Helix 32
32
C
271 275Right-handed 310
Helix 33
33
C
276 290Right-handed alpha
Helix 34
34
C
301 346Right-handed alpha
Helix 35
35
D
34 50Right-handed alpha
Helix 36
36
D
51 55Right-handed 310
Helix 37
37
D
66 89Right-handed alpha
Helix 38
38
D
115 140Right-handed alpha
Helix 39
39
D
160 177Right-handed alpha
Helix 40
40
D
180 185Right-handed alpha
Helix 41
41
D
195 203Right-handed 310
Helix 42
42
D
212 225Right-handed alpha
Helix 43
43
D
227 239Right-handed alpha
Helix 44
44
D
248 252Right-handed 310
Helix 45
45
D
254 261Right-handed alpha
Helix 46
46
D
276 290Right-handed alpha
Helix 47
47
D
301 348Right-handed alpha
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There are 4 sheets in PDB entry 1L8W. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
149 150first strand
Strand 2
A
295 296parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
149 150first strand
Strand 2
B
295 296parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
149 150first strand
Strand 2
C
295 296parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
149 150first strand
Strand 2
D
295 296parallel
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