Analysis of interatomic Contacts of Structural Units in PDB entry:
1LB1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1LB1 entry

There are 8 chains in PDB entry 1LB1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 624ARG 953
B
 ALA 3GLN 180
C
 GLU 624ARG 953
D
 ALA 3GLN 180
E
 GLU 624ARG 953
F
 ALA 3GLN 180
G
 GLU 624ARG 953
H
 ALA 3GLN 180
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are108 helices in PDB entry 1LB1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
624 658Right-handed alpha
Helix 2
2
A
659 671Right-handed 310
Helix 3
3
A
672 678Right-handed alpha
Helix 4
4
A
678 684Right-handed alpha
Helix 5
5
A
685 696Right-handed alpha
Helix 6
6
A
696 703Right-handed alpha
Helix 7
7
A
707 710Right-handed 310
Helix 8
8
A
711 717Right-handed alpha
Helix 9
9
A
718 719Right-handed 310
Helix 10
10
A
720 722Right-handed 310
Helix 11
11
A
723 743Right-handed alpha
Helix 12
12
A
745 756Right-handed alpha
Helix 13
13
A
760 766Right-handed alpha
Helix 14
14
A
766 773Right-handed alpha
Helix 15
15
A
774 785Right-handed alpha
Helix 16
16
A
791 816Right-handed alpha
Helix 17
17
A
825 829Right-handed 310
Helix 18
18
A
882 886Right-handed 310
Helix 19
19
A
930 952Right-handed alpha
Helix 20
20
B
17 28Right-handed alpha
Helix 21
21
B
69 74Right-handed 310
Helix 22
22
B
88 98Right-handed alpha
Helix 23
23
B
98 107Right-handed alpha
Helix 24
24
B
118 122Right-handed 310
Helix 25
25
B
124 134Right-handed alpha
Helix 26
26
B
140 152Right-handed alpha
Helix 27
27
B
166 180Right-handed alpha
Helix 28
28
C
624 658Right-handed alpha
Helix 29
29
C
659 671Right-handed 310
Helix 30
30
C
672 678Right-handed alpha
Helix 31
31
C
678 684Right-handed alpha
Helix 32
32
C
685 696Right-handed alpha
Helix 33
33
C
696 703Right-handed alpha
Helix 34
34
C
707 709Right-handed 310
Helix 35
35
C
710 717Right-handed alpha
Helix 36
36
C
718 719Right-handed 310
Helix 37
37
C
720 722Right-handed 310
Helix 38
38
C
723 743Right-handed alpha
Helix 39
39
C
745 756Right-handed alpha
Helix 40
40
C
760 766Right-handed alpha
Helix 41
41
C
766 773Right-handed alpha
Helix 42
42
C
774 785Right-handed alpha
Helix 43
43
C
791 816Right-handed alpha
Helix 44
44
C
825 829Right-handed 310
Helix 45
45
C
882 886Right-handed 310
Helix 46
46
C
930 952Right-handed alpha
Helix 47
47
D
17 28Right-handed alpha
Helix 48
48
D
69 74Right-handed 310
Helix 49
49
D
88 98Right-handed alpha
Helix 50
50
D
98 107Right-handed alpha
Helix 51
51
D
118 122Right-handed 310
Helix 52
52
D
124 134Right-handed alpha
Helix 53
53
D
140 152Right-handed alpha
Helix 54
54
D
166 180Right-handed alpha
Helix 55
55
E
624 658Right-handed alpha
Helix 56
56
E
659 671Right-handed 310
Helix 57
57
E
672 678Right-handed alpha
Helix 58
58
E
678 684Right-handed alpha
Helix 59
59
E
685 696Right-handed alpha
Helix 60
60
E
696 703Right-handed alpha
Helix 61
61
E
707 710Right-handed 310
Helix 62
62
E
711 717Right-handed alpha
Helix 63
63
E
718 719Right-handed 310
Helix 64
64
E
720 722Right-handed 310
Helix 65
65
E
723 743Right-handed alpha
Helix 66
66
E
745 756Right-handed alpha
Helix 67
67
E
760 766Right-handed alpha
Helix 68
68
E
766 773Right-handed alpha
Helix 69
69
E
774 785Right-handed alpha
Helix 70
70
E
791 816Right-handed alpha
Helix 71
71
E
825 829Right-handed 310
Helix 72
72
E
882 886Right-handed 310
Helix 73
73
E
930 952Right-handed alpha
Helix 74
74
F
17 28Right-handed alpha
Helix 75
75
F
69 74Right-handed 310
Helix 76
76
F
88 98Right-handed alpha
Helix 77
77
F
98 107Right-handed alpha
Helix 78
78
F
118 122Right-handed 310
Helix 79
79
F
124 134Right-handed alpha
Helix 80
80
F
140 152Right-handed alpha
Helix 81
81
F
166 180Right-handed alpha
Helix 82
82
G
624 658Right-handed alpha
Helix 83
83
G
659 671Right-handed 310
Helix 84
84
G
672 678Right-handed alpha
Helix 85
85
G
678 684Right-handed alpha
Helix 86
86
G
685 696Right-handed alpha
Helix 87
87
G
696 703Right-handed alpha
Helix 88
88
G
707 710Right-handed 310
Helix 89
89
G
711 717Right-handed alpha
Helix 90
90
G
718 719Right-handed 310
Helix 91
91
G
720 722Right-handed 310
Helix 92
92
G
723 743Right-handed alpha
Helix 93
93
G
745 756Right-handed alpha
Helix 94
94
G
760 766Right-handed alpha
Helix 95
95
G
766 773Right-handed alpha
Helix 96
96
G
774 785Right-handed alpha
Helix 97
97
G
791 816Right-handed alpha
Helix 98
98
G
825 829Right-handed 310
Helix 99
99
G
882 886Right-handed 310
Helix 100
100
G
930 952Right-handed alpha
Helix 101
101
H
17 28Right-handed alpha
Helix 102
102
H
69 74Right-handed 310
Helix 103
103
H
88 98Right-handed alpha
Helix 104
104
H
98 107Right-handed alpha
Helix 105
105
H
118 122Right-handed 310
Helix 106
106
H
124 134Right-handed alpha
Helix 107
107
H
140 152Right-handed alpha
Helix 108
108
H
166 180Right-handed alpha
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There are 8 sheets in PDB entry 1LB1. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
818 819first strand
Strand 2
A
888 896parallel
Strand 3
A
869 876anti-parallel
Strand 4
A
859 866anti-parallel
Strand 5
A
831 841anti-parallel
Strand 6
A
922 927anti-parallel
Strand 7
A
912 917anti-parallel
Strand 8
A
900 903anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
42 48first strand
Strand 2
B
51 58anti-parallel
Strand 3
B
4 11parallel
Strand 4
B
79 85parallel
Strand 5
B
114 117parallel
Strand 6
B
156 158parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
818 819first strand
Strand 2
C
888 896parallel
Strand 3
C
869 876anti-parallel
Strand 4
C
859 866anti-parallel
Strand 5
C
831 841anti-parallel
Strand 6
C
922 927anti-parallel
Strand 7
C
912 917anti-parallel
Strand 8
C
900 903anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
42 48first strand
Strand 2
D
51 58anti-parallel
Strand 3
D
4 11parallel
Strand 4
D
79 85parallel
Strand 5
D
114 117parallel
Strand 6
D
156 158parallel
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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
818 819first strand
Strand 2
E
888 896parallel
Strand 3
E
869 876anti-parallel
Strand 4
E
859 866anti-parallel
Strand 5
E
831 841anti-parallel
Strand 6
E
922 927anti-parallel
Strand 7
E
912 917anti-parallel
Strand 8
E
900 903anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
42 48first strand
Strand 2
F
51 58anti-parallel
Strand 3
F
4 11parallel
Strand 4
F
79 85parallel
Strand 5
F
114 117parallel
Strand 6
F
156 158parallel
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There are 8 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
818 819first strand
Strand 2
G
888 896parallel
Strand 3
G
869 876anti-parallel
Strand 4
G
859 866anti-parallel
Strand 5
G
831 841anti-parallel
Strand 6
G
922 927anti-parallel
Strand 7
G
912 917anti-parallel
Strand 8
G
900 903anti-parallel
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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
42 48first strand
Strand 2
H
51 58anti-parallel
Strand 3
H
4 11parallel
Strand 4
H
79 85parallel
Strand 5
H
114 117parallel
Strand 6
H
156 158parallel
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