Analysis of interatomic Contacts of Structural Units in PDB entry:
1LBE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1LBE entry

There are 2 chains in PDB entry 1LBE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 1LEU 250
B
 ILE 1CYS 248
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 1LBE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
7 21Right-handed alpha
Helix 2
2
A
34 45Right-handed alpha
Helix 3
3
A
55 57Right-handed 310
Helix 4
4
A
59 65Right-handed alpha
Helix 5
5
A
81 88Right-handed alpha
Helix 6
6
A
97 99Right-handed 310
Helix 7
7
A
101 106Right-handed alpha
Helix 8
8
A
133 136Right-handed alpha
Helix 9
9
A
140 150Right-handed alpha
Helix 10
10
A
174 177Right-handed alpha
Helix 11
11
A
180 182Right-handed 310
Helix 12
12
A
210 220Right-handed alpha
Helix 13
13
A
232 241Right-handed alpha
Helix 14
14
A
246 248Right-handed 310
Helix 15
15
B
7 21Right-handed alpha
Helix 16
16
B
34 44Right-handed alpha
Helix 17
17
B
59 65Right-handed alpha
Helix 18
18
B
81 88Right-handed alpha
Helix 19
19
B
97 99Right-handed 310
Helix 20
20
B
101 106Right-handed alpha
Helix 21
21
B
133 136Right-handed alpha
Helix 22
22
B
138 150Right-handed alpha
Helix 23
23
B
174 177Right-handed alpha
Helix 24
24
B
179 182Right-handed alpha
Helix 25
25
B
209 221Right-handed alpha
Helix 26
26
B
232 242Right-handed alpha
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There are 2 sheets in PDB entry 1LBE. Click on sheet of interest to get list of strands forming it: A, B,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
75 78first strand
Strand 2
A
153 160parallel
Strand 3
A
187 195parallel
Strand 4
A
224 229parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
74 78first strand
Strand 2
B
153 160parallel
Strand 3
B
187 195parallel
Strand 4
B
224 229parallel
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