Analysis of interatomic Contacts of Structural Units in PDB entry:
1LBG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1LBG entry

There are 8 chains in PDB entry 1LBG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
E
 G 400 T 420
F
 G 500 T 520
G
 G 600 T 620
H
 G 700 T 720
A
 MET 1GLU 357
B
 MET 1GLU 357
C
 MET 1GLU 357
D
 MET 1GLU 357
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 1LBG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
A1
A
6 12Right-handed alpha
Helix 2
A2
A
17 25Right-handed alpha
Helix 3
A3
A
32 45Right-handed alpha
Helix 4
A4
A
50 58Right-handed alpha
Helix 5
A5
A
74 90Right-handed alpha
Helix 6
A6
A
104 116Right-handed alpha
Helix 7
A7
A
131 137Right-handed alpha
Helix 8
A8
A
164 175Right-handed alpha
Helix 9
A9
A
192 205Right-handed alpha
Helix 10
A10
A
222 233Right-handed alpha
Helix 11
A11
A
247 259Right-handed alpha
Helix 12
A12
A
279 281Right-handed alpha
Helix 13
A13
A
293 309Right-handed alpha
Helix 14
A14
A
340 357Right-handed alpha
Helix 15
B1
B
6 12Right-handed alpha
Helix 16
B2
B
17 25Right-handed alpha
Helix 17
B3
B
32 45Right-handed alpha
Helix 18
B4
B
50 58Right-handed alpha
Helix 19
B5
B
74 90Right-handed alpha
Helix 20
B6
B
104 116Right-handed alpha
Helix 21
B7
B
131 137Right-handed alpha
Helix 22
B8
B
164 175Right-handed alpha
Helix 23
B9
B
192 205Right-handed alpha
Helix 24
B10
B
222 233Right-handed alpha
Helix 25
B11
B
247 259Right-handed alpha
Helix 26
B12
B
279 281Right-handed alpha
Helix 27
B13
B
293 309Right-handed alpha
Helix 28
B14
B
340 357Right-handed alpha
Helix 29
C1
C
6 12Right-handed alpha
Helix 30
C2
C
17 25Right-handed alpha
Helix 31
C3
C
32 45Right-handed alpha
Helix 32
C4
C
50 58Right-handed alpha
Helix 33
C5
C
74 90Right-handed alpha
Helix 34
C6
C
104 116Right-handed alpha
Helix 35
C7
C
131 137Right-handed alpha
Helix 36
C8
C
164 175Right-handed alpha
Helix 37
C9
C
192 205Right-handed alpha
Helix 38
C10
C
222 233Right-handed alpha
Helix 39
C11
C
247 259Right-handed alpha
Helix 40
C12
C
279 281Right-handed alpha
Helix 41
C13
C
293 309Right-handed alpha
Helix 42
C14
C
340 357Right-handed alpha
Helix 43
D1
D
6 12Right-handed alpha
Helix 44
D2
D
17 25Right-handed alpha
Helix 45
D3
D
32 45Right-handed alpha
Helix 46
D4
D
50 58Right-handed alpha
Helix 47
D5
D
74 90Right-handed alpha
Helix 48
D6
D
104 116Right-handed alpha
Helix 49
D7
D
131 137Right-handed alpha
Helix 50
D8
D
164 175Right-handed alpha
Helix 51
D9
D
192 205Right-handed alpha
Helix 52
D10
D
222 233Right-handed alpha
Helix 53
D11
D
247 259Right-handed alpha
Helix 54
D12
D
279 281Right-handed alpha
Helix 55
D13
D
293 309Right-handed alpha
Helix 56
D14
D
340 357Right-handed alpha
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There are 8 sheets in PDB entry 1LBG. Click on sheet of interest to get list of strands forming it: S1A, S2A, S1B, S2B, S1C, S2C, S1D, S2D,

There are 6 strands in S1A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 98first strand
Strand 2
A
63 68parallel
Strand 3
A
121 124parallel
Strand 4
A
145 149parallel
Strand 5
A
158 161parallel
Strand 6
A
316 318parallel
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There are 6 strands in S2A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
214 217first strand
Strand 2
A
182 185parallel
Strand 3
A
240 244parallel
Strand 4
A
269 274parallel
Strand 5
A
287 290parallel
Strand 6
A
322 324anti-parallel
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There are 6 strands in S1B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
92 98first strand
Strand 2
B
63 68parallel
Strand 3
B
121 124parallel
Strand 4
B
145 149parallel
Strand 5
B
158 161parallel
Strand 6
B
316 318parallel
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There are 6 strands in S2B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
214 217first strand
Strand 2
B
182 185parallel
Strand 3
B
240 244parallel
Strand 4
B
269 274parallel
Strand 5
B
287 290parallel
Strand 6
B
322 324anti-parallel
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There are 6 strands in S1C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
92 98first strand
Strand 2
C
63 68parallel
Strand 3
C
121 124parallel
Strand 4
C
145 149parallel
Strand 5
C
158 161parallel
Strand 6
C
316 318parallel
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There are 6 strands in S2C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
214 217first strand
Strand 2
C
182 185parallel
Strand 3
C
240 244parallel
Strand 4
C
269 274parallel
Strand 5
C
287 290parallel
Strand 6
C
322 324anti-parallel
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There are 6 strands in S1D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
92 98first strand
Strand 2
D
63 68parallel
Strand 3
D
121 124parallel
Strand 4
D
145 149parallel
Strand 5
D
158 161parallel
Strand 6
D
316 318parallel
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There are 6 strands in S2D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
214 217first strand
Strand 2
D
182 185parallel
Strand 3
D
240 244parallel
Strand 4
D
269 274parallel
Strand 5
D
287 290parallel
Strand 6
D
322 324anti-parallel
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