Analysis of interatomic Contacts of Structural Units in PDB entry:
1LBN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1LBN entry

There is 1 chain in PDB entry 1LBN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 100ILE 265
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 1LBN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
100 135Right-handed alpha
Helix 2
2
A
147 165Right-handed alpha
Helix 3
3
A
166 169Right-handed 310
Helix 4
4
A
191 194Right-handed 310
Helix 5
5
A
195 207Right-handed alpha
Helix 6
6
A
208 223Right-handed alpha
Helix 7
7
A
238 256Right-handed alpha
Helix 8
8
A
258 265Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1LBN.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
174 177first strand
Strand 2
A
182 185anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il