Analysis of interatomic Contacts of Structural Units in PDB entry:
1LBQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1LBQ entry

There are 2 chains in PDB entry 1LBQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 36GLU 391
B
 PRO 38GLU 391
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 1LBQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
51 53Right-handed 310
Helix 2
2
A
54 63Right-handed alpha
Helix 3
3
A
75 98Right-handed alpha
Helix 4
4
A
103 123Right-handed alpha
Helix 5
5
A
124 127Right-handed 310
Helix 6
6
A
141 151Right-handed alpha
Helix 7
7
A
170 186Right-handed alpha
Helix 8
8
A
202 219Right-handed alpha
Helix 9
9
A
224 228Right-handed 310
Helix 10
10
A
238 243Right-handed alpha
Helix 11
11
A
247 263Right-handed alpha
Helix 12
12
A
286 295Right-handed alpha
Helix 13
13
A
296 298Right-handed 310
Helix 14
14
A
312 317Right-handed alpha
Helix 15
15
A
329 331Right-handed 310
Helix 16
16
A
342 360Right-handed alpha
Helix 17
17
A
366 374Right-handed alpha
Helix 18
18
A
382 387Right-handed alpha
Helix 19
19
B
54 64Right-handed alpha
Helix 20
20
B
75 98Right-handed alpha
Helix 21
21
B
103 123Right-handed alpha
Helix 22
22
B
124 127Right-handed 310
Helix 23
23
B
141 152Right-handed alpha
Helix 24
24
B
170 186Right-handed alpha
Helix 25
25
B
202 218Right-handed alpha
Helix 26
26
B
221 226Right-handed alpha
Helix 27
27
B
238 243Right-handed alpha
Helix 28
28
B
247 263Right-handed alpha
Helix 29
29
B
286 295Right-handed alpha
Helix 30
30
B
312 317Right-handed alpha
Helix 31
31
B
342 358Right-handed alpha
Helix 32
32
B
366 374Right-handed alpha
Helix 33
33
B
382 387Right-handed alpha
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There are 4 sheets in PDB entry 1LBQ. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
129 135first strand
Strand 2
A
39 45parallel
Strand 3
A
156 161parallel
Strand 4
A
192 196parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
269 274first strand
Strand 2
A
229 235parallel
Strand 3
A
301 304parallel
Strand 4
A
333 335parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
129 135first strand
Strand 2
B
39 45parallel
Strand 3
B
156 161parallel
Strand 4
B
192 196parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
269 274first strand
Strand 2
B
229 235parallel
Strand 3
B
301 304parallel
Strand 4
B
333 335parallel
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