Analysis of interatomic Contacts of Structural Units in PDB entry:
1LF8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1LF8 entry


Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 8 chains in PDB entry 1LF8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 7ILE 157
B
 GLY -1ILE 157
C
 SER 8LEU 156
D
 GLY -1ILE 157
E
 ASP 306ILE 312
F
 ASP 306ILE 312
G
 ASP 306ILE 312
H
 ASP 306ILE 312
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 1LF8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 18Right-handed alpha
Helix 2
2
A
25 39Right-handed alpha
Helix 3
3
A
41 55Right-handed alpha
Helix 4
4
A
58 76Right-handed alpha
Helix 5
5
A
76 85Right-handed alpha
Helix 6
6
A
86 98Right-handed alpha
Helix 7
7
A
102 106Right-handed 310
Helix 8
8
A
107 125Right-handed alpha
Helix 9
9
A
128 141Right-handed alpha
Helix 10
10
B
-1 2Right-handed 310
Helix 11
11
B
3 18Right-handed alpha
Helix 12
12
B
25 39Right-handed alpha
Helix 13
13
B
41 55Right-handed alpha
Helix 14
14
B
58 76Right-handed alpha
Helix 15
15
B
76 85Right-handed alpha
Helix 16
16
B
86 98Right-handed alpha
Helix 17
17
B
102 106Right-handed 310
Helix 18
18
B
107 125Right-handed alpha
Helix 19
19
B
128 141Right-handed alpha
Helix 20
20
C
8 17Right-handed alpha
Helix 21
21
C
25 39Right-handed alpha
Helix 22
22
C
41 55Right-handed alpha
Helix 23
23
C
58 76Right-handed alpha
Helix 24
24
C
76 85Right-handed alpha
Helix 25
25
C
86 98Right-handed alpha
Helix 26
26
C
102 106Right-handed 310
Helix 27
27
C
107 125Right-handed alpha
Helix 28
28
C
128 141Right-handed alpha
Helix 29
29
D
-1 2Right-handed 310
Helix 30
30
D
3 17Right-handed alpha
Helix 31
31
D
25 39Right-handed alpha
Helix 32
32
D
41 55Right-handed alpha
Helix 33
33
D
58 76Right-handed alpha
Helix 34
34
D
76 85Right-handed alpha
Helix 35
35
D
86 98Right-handed alpha
Helix 36
36
D
107 125Right-handed alpha
Helix 37
37
D
128 141Right-handed alpha
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There are no sheets in PDB entry 1LF8
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