Analysis of interatomic Contacts of Structural Units in PDB entry:
1LGR

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 1LGR entry

There are 12 chains in PDB entry 1LGR (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 1	VAL 468
B	SER 1	VAL 468
C	SER 1	VAL 468
D	SER 1	VAL 468
E	SER 1	VAL 468
F	SER 1	VAL 468
G	SER 1	VAL 468
H	SER 1	VAL 468
I	SER 1	VAL 468
J	SER 1	VAL 468
K	SER 1	VAL 468
L	SER 1	VAL 468

There are118 helices in PDB entry 1LGR. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA	A	1	11	Right-handed alpha
Helix 2	AB	A	103	117	Right-handed alpha
Helix 3	AC	A	188	201	Right-handed alpha
Helix 4	AD	A	227	249	Right-handed alpha
Helix 5	AE	A	291	312	Right-handed alpha
Helix 6	AF	A	317	321	Right-handed alpha
Helix 7	AG	A	366	383	Right-handed alpha
Helix 8	AH	A	413	429	Right-handed alpha
Helix 9	AI	A	435	455	Right-handed alpha
Helix 10	AJ	A	458	465	Right-handed alpha
Helix 11	BA	B	1	11	Right-handed alpha
Helix 12	BB	B	103	117	Right-handed alpha
Helix 13	BC	B	188	201	Right-handed alpha
Helix 14	BD	B	227	249	Right-handed alpha
Helix 15	BE	B	291	312	Right-handed alpha
Helix 16	BF	B	317	321	Right-handed alpha
Helix 17	BG	B	366	383	Right-handed alpha
Helix 18	BH	B	413	429	Right-handed alpha
Helix 19	BI	B	435	455	Right-handed alpha
Helix 20	BJ	B	458	465	Right-handed alpha
Helix 21	CA	C	1	11	Right-handed alpha
Helix 22	CB	C	103	117	Right-handed alpha
Helix 23	CC	C	188	201	Right-handed alpha
Helix 24	CD	C	227	249	Right-handed alpha
Helix 25	CE	C	291	312	Right-handed alpha
Helix 26	CF	C	317	321	Right-handed alpha
Helix 27	CG	C	366	383	Right-handed alpha
Helix 28	CH	C	413	429	Right-handed alpha
Helix 29	CI	C	435	455	Right-handed alpha
Helix 30	CJ	C	458	465	Right-handed alpha
Helix 31	A	D	1	11	Right-handed alpha
Helix 32	DB	D	103	117	Right-handed alpha
Helix 33	C	D	188	201	Right-handed alpha
Helix 34	DD	D	227	249	Right-handed alpha
Helix 35	DE	D	291	312	Right-handed alpha
Helix 36	DF	D	317	321	Right-handed alpha
Helix 37	G	D	366	383	Right-handed alpha
Helix 38	DH	D	413	429	Right-handed alpha
Helix 39	DI	D	435	455	Right-handed alpha
Helix 40	DJ	D	458	465	Right-handed alpha
Helix 41	EA	E	1	11	Right-handed alpha
Helix 42	EB	E	103	117	Right-handed alpha
Helix 43	EC	E	188	201	Right-handed alpha
Helix 44	ED	E	227	249	Right-handed alpha
Helix 45	EE	E	291	312	Right-handed alpha
Helix 46	EF	E	317	321	Right-handed alpha
Helix 47	EG	E	366	383	Right-handed alpha
Helix 48	EH	E	413	429	Right-handed alpha
Helix 49	EI	E	435	455	Right-handed alpha
Helix 50	EJ	E	458	465	Right-handed alpha
Helix 51	FA	F	1	11	Right-handed alpha
Helix 52	FB	F	103	117	Right-handed alpha
Helix 53	FC	F	188	201	Right-handed alpha
Helix 54	FD	F	227	249	Right-handed alpha
Helix 55	FE	F	291	312	Right-handed alpha
Helix 56	FF	F	317	321	Right-handed alpha
Helix 57	FG	F	366	383	Right-handed alpha
Helix 58	FH	F	413	429	Right-handed alpha
Helix 59	FI	F	435	455	Right-handed alpha
Helix 60	FJ	F	458	465	Right-handed alpha
Helix 61	GA	G	1	11	Right-handed alpha
Helix 62	GB	G	103	117	Right-handed alpha
Helix 63	GC	G	188	201	Right-handed alpha
Helix 64	GD	G	227	249	Right-handed alpha
Helix 65	GE	G	291	312	Right-handed alpha
Helix 66	GF	G	317	321	Right-handed alpha
Helix 67	GG	G	366	383	Right-handed alpha
Helix 68	GH	G	413	429	Right-handed alpha
Helix 69	GI	G	435	455	Right-handed alpha
Helix 70	GJ	G	458	465	Right-handed alpha
Helix 71	HA	H	1	11	Right-handed alpha
Helix 72	HB	H	103	117	Right-handed alpha
Helix 73	HC	H	188	201	Right-handed alpha
Helix 74	HD	H	227	249	Right-handed alpha
Helix 75	HE	H	291	312	Right-handed alpha
Helix 76	HF	H	317	321	Right-handed alpha
Helix 77	HG	H	366	383	Right-handed alpha
Helix 78	HH	H	413	429	Right-handed alpha
Helix 79	HI	H	435	455	Right-handed alpha
Helix 80	HJ	H	458	465	Right-handed alpha
Helix 81	IA	I	1	11	Right-handed alpha
Helix 82	IB	I	103	117	Right-handed alpha
Helix 83	IC	I	188	201	Right-handed alpha
Helix 84	ID	I	227	249	Right-handed alpha
Helix 85	IE	I	291	312	Right-handed alpha
Helix 86	IF	I	317	321	Right-handed alpha
Helix 87	IG	I	366	383	Right-handed alpha
Helix 88	IH	I	413	429	Right-handed alpha
Helix 89	II	I	435	455	Right-handed alpha
Helix 90	IJ	I	458	465	Right-handed alpha
Helix 91	JA	J	1	11	Right-handed alpha
Helix 92	JB	J	103	117	Right-handed alpha
Helix 93	JC	J	188	201	Right-handed alpha
Helix 94	JD	J	227	249	Right-handed alpha
Helix 95	JE	J	291	312	Right-handed alpha
Helix 96	JF	J	317	321	Right-handed alpha
Helix 97	JG	J	366	383	Right-handed alpha
Helix 98	JH	J	413	429	Right-handed alpha
Helix 99	JI	J	435	455	Right-handed alpha
Helix 100	JJ	J	458	465	Right-handed alpha
Helix 101	KA	K	1	11	Right-handed alpha
Helix 102	KB	K	103	117	Right-handed alpha
Helix 103	KC	K	188	201	Right-handed alpha
Helix 104	KD	K	227	249	Right-handed alpha
Helix 105	KE	K	291	312	Right-handed alpha
Helix 106	KF	K	317	321	Right-handed alpha
Helix 107	KG	K	366	383	Right-handed alpha
Helix 108	KH	K	413	429	Right-handed alpha
Helix 109	KI	K	435	455	Right-handed alpha
Helix 110	KJ	K	458	465	Right-handed alpha
Helix 111	LB	L	103	117	Right-handed alpha
Helix 112	LD	L	227	249	Right-handed alpha
Helix 113	LE	L	291	312	Right-handed alpha
Helix 114	LF	L	317	321	Right-handed alpha
Helix 115	LG	L	366	383	Right-handed alpha
Helix 116	LH	L	413	429	Right-handed alpha
Helix 117	LI	L	435	455	Right-handed alpha
Helix 118	LJ	L	458	465	Right-handed alpha

There are 12 sheets in PDB entry 1LGR. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 14 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	15	21	first strand
Strand 2	A	27	33	parallel
Strand 3	A	46	49	parallel
Strand 4	A	64	68	parallel
Strand 5	A	83	91	parallel
Strand 6	A	122	134	parallel
Strand 7	A	136	144	parallel
Strand 8	A	145	151	parallel
Strand 9	A	205	210	parallel
Strand 10	A	217	222	parallel
Strand 11	A	267	275	parallel
Strand 12	A	330	334	parallel
Strand 13	A	340	344	parallel
Strand 14	A	355	358	parallel

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There are 14 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	15	21	first strand
Strand 2	B	27	33	parallel
Strand 3	B	46	49	parallel
Strand 4	B	64	68	parallel
Strand 5	B	83	91	parallel
Strand 6	B	122	134	parallel
Strand 7	B	136	144	parallel
Strand 8	B	145	151	parallel
Strand 9	B	205	210	parallel
Strand 10	B	217	222	parallel
Strand 11	B	267	275	parallel
Strand 12	B	330	334	parallel
Strand 13	B	340	344	parallel
Strand 14	B	355	358	parallel

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There are 14 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	15	21	first strand
Strand 2	C	27	33	parallel
Strand 3	C	46	49	parallel
Strand 4	C	64	68	parallel
Strand 5	C	83	91	parallel
Strand 6	C	122	134	parallel
Strand 7	C	136	144	parallel
Strand 8	C	145	151	parallel
Strand 9	C	205	210	parallel
Strand 10	C	217	222	parallel
Strand 11	C	267	275	parallel
Strand 12	C	330	334	parallel
Strand 13	C	340	344	parallel
Strand 14	C	355	358	parallel

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There are 14 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	15	21	first strand
Strand 2	D	27	33	parallel
Strand 3	D	46	49	parallel
Strand 4	D	64	68	parallel
Strand 5	D	83	91	parallel
Strand 6	D	122	134	parallel
Strand 7	D	136	144	parallel
Strand 8	D	145	151	parallel
Strand 9	D	205	210	parallel
Strand 10	D	217	222	parallel
Strand 11	D	267	275	parallel
Strand 12	D	330	334	parallel
Strand 13	D	340	344	parallel
Strand 14	D	355	358	parallel

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There are 14 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	15	21	first strand
Strand 2	E	27	33	parallel
Strand 3	E	46	49	parallel
Strand 4	E	64	68	parallel
Strand 5	E	83	91	parallel
Strand 6	E	122	134	parallel
Strand 7	E	136	144	parallel
Strand 8	E	145	151	parallel
Strand 9	E	205	210	parallel
Strand 10	E	217	222	parallel
Strand 11	E	267	275	parallel
Strand 12	E	330	334	parallel
Strand 13	E	340	344	parallel
Strand 14	E	355	358	parallel

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There are 14 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	15	21	first strand
Strand 2	F	27	33	parallel
Strand 3	F	46	49	parallel
Strand 4	F	64	68	parallel
Strand 5	F	83	91	parallel
Strand 6	F	122	134	parallel
Strand 7	F	136	144	parallel
Strand 8	F	145	151	parallel
Strand 9	F	205	210	parallel
Strand 10	F	217	222	parallel
Strand 11	F	267	275	parallel
Strand 12	F	330	334	parallel
Strand 13	F	340	344	parallel
Strand 14	F	355	358	parallel

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There are 14 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	15	21	first strand
Strand 2	G	27	33	parallel
Strand 3	G	46	49	parallel
Strand 4	G	64	68	parallel
Strand 5	G	83	91	parallel
Strand 6	G	122	134	parallel
Strand 7	G	136	144	parallel
Strand 8	G	145	151	parallel
Strand 9	G	205	210	parallel
Strand 10	G	217	222	parallel
Strand 11	G	267	275	parallel
Strand 12	G	330	334	parallel
Strand 13	G	340	344	parallel
Strand 14	G	355	358	parallel

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There are 14 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	15	21	first strand
Strand 2	H	27	33	parallel
Strand 3	H	46	49	parallel
Strand 4	H	64	68	parallel
Strand 5	H	83	91	parallel
Strand 6	H	122	134	parallel
Strand 7	H	136	144	parallel
Strand 8	H	145	151	parallel
Strand 9	H	205	210	parallel
Strand 10	H	217	222	parallel
Strand 11	H	267	275	parallel
Strand 12	H	330	334	parallel
Strand 13	H	340	344	parallel
Strand 14	H	355	358	parallel

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There are 14 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	15	21	first strand
Strand 2	I	27	33	parallel
Strand 3	I	46	49	parallel
Strand 4	I	64	68	parallel
Strand 5	I	83	91	parallel
Strand 6	I	122	134	parallel
Strand 7	I	136	144	parallel
Strand 8	I	145	151	parallel
Strand 9	I	205	210	parallel
Strand 10	I	217	222	parallel
Strand 11	I	267	275	parallel
Strand 12	I	330	334	parallel
Strand 13	I	340	344	parallel
Strand 14	I	355	358	parallel

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There are 14 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	15	21	first strand
Strand 2	J	27	33	parallel
Strand 3	J	46	49	parallel
Strand 4	J	64	68	parallel
Strand 5	J	83	91	parallel
Strand 6	J	122	134	parallel
Strand 7	J	136	144	parallel
Strand 8	J	145	151	parallel
Strand 9	J	205	210	parallel
Strand 10	J	217	222	parallel
Strand 11	J	267	275	parallel
Strand 12	J	330	334	parallel
Strand 13	J	340	344	parallel
Strand 14	J	355	358	parallel

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There are 14 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	15	21	first strand
Strand 2	K	27	33	parallel
Strand 3	K	46	49	parallel
Strand 4	K	64	68	parallel
Strand 5	K	83	91	parallel
Strand 6	K	122	134	parallel
Strand 7	K	136	144	parallel
Strand 8	K	145	151	parallel
Strand 9	K	205	210	parallel
Strand 10	K	217	222	parallel
Strand 11	K	267	275	parallel
Strand 12	K	330	334	parallel
Strand 13	K	340	344	parallel
Strand 14	K	355	358	parallel

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There are 14 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	15	21	first strand
Strand 2	L	27	33	parallel
Strand 3	L	46	49	parallel
Strand 4	L	64	68	parallel
Strand 5	L	83	91	parallel
Strand 6	L	122	134	parallel
Strand 7	L	136	144	parallel
Strand 8	L	145	151	parallel
Strand 9	L	205	210	parallel
Strand 10	L	217	222	parallel
Strand 11	L	267	275	parallel
Strand 12	L	330	334	parallel
Strand 13	L	340	344	parallel
Strand 14	L	355	358	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 1LGR

Analysis of interatomic Contacts of Structural Units in PDB entry:
1LGR