Analysis of interatomic Contacts of Structural Units in PDB entry:
1LL0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 1LL0 entry

There are 10 chains in PDB entry 1LL0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET -1	VAL 266
B	VAL -7	VAL 266
C	MET -1	VAL 266
D	MET -1	VAL 266
E	HIS -2	VAL 266
F	MET -1	VAL 266
G	MET -1	VAL 266
H	MET -1	GLY 264
I	ARG -5	VAL 266
J	THR 1	LEU 259

There are150 helices in PDB entry 1LL0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	11	28	Right-handed alpha
Helix 2	2	A	43	54	Right-handed alpha
Helix 3	3	A	69	76	Right-handed alpha
Helix 4	4	A	79	87	Right-handed alpha
Helix 5	5	A	88	91	Right-handed 310
Helix 6	6	A	110	116	Right-handed 310
Helix 7	7	A	141	156	Right-handed alpha
Helix 8	8	A	161	170	Right-handed alpha
Helix 9	9	A	177	181	Right-handed 310
Helix 10	10	A	183	187	Right-handed 310
Helix 11	11	A	191	196	Right-handed alpha
Helix 12	12	A	196	204	Right-handed alpha
Helix 13	13	A	205	207	Right-handed 310
Helix 14	14	A	217	221	Right-handed 310
Helix 15	15	A	239	263	Right-handed alpha
Helix 16	16	B	11	28	Right-handed alpha
Helix 17	17	B	43	54	Right-handed alpha
Helix 18	18	B	69	76	Right-handed alpha
Helix 19	19	B	79	86	Right-handed alpha
Helix 20	20	B	87	91	Right-handed 310
Helix 21	21	B	110	116	Right-handed 310
Helix 22	22	B	141	156	Right-handed alpha
Helix 23	23	B	161	170	Right-handed alpha
Helix 24	24	B	177	181	Right-handed 310
Helix 25	25	B	183	188	Right-handed alpha
Helix 26	26	B	191	196	Right-handed alpha
Helix 27	27	B	196	204	Right-handed alpha
Helix 28	28	B	205	207	Right-handed 310
Helix 29	29	B	217	221	Right-handed 310
Helix 30	30	B	239	262	Right-handed alpha
Helix 31	31	C	11	28	Right-handed alpha
Helix 32	32	C	43	54	Right-handed alpha
Helix 33	33	C	69	76	Right-handed alpha
Helix 34	34	C	79	87	Right-handed alpha
Helix 35	35	C	88	91	Right-handed 310
Helix 36	36	C	110	116	Right-handed 310
Helix 37	37	C	141	156	Right-handed alpha
Helix 38	38	C	161	170	Right-handed alpha
Helix 39	39	C	177	181	Right-handed 310
Helix 40	40	C	183	187	Right-handed 310
Helix 41	41	C	191	196	Right-handed alpha
Helix 42	42	C	196	204	Right-handed alpha
Helix 43	43	C	205	207	Right-handed 310
Helix 44	44	C	217	221	Right-handed 310
Helix 45	45	C	239	263	Right-handed alpha
Helix 46	46	D	11	28	Right-handed alpha
Helix 47	47	D	43	54	Right-handed alpha
Helix 48	48	D	69	76	Right-handed alpha
Helix 49	49	D	79	87	Right-handed alpha
Helix 50	50	D	88	91	Right-handed 310
Helix 51	51	D	110	116	Right-handed 310
Helix 52	52	D	141	156	Right-handed alpha
Helix 53	53	D	161	170	Right-handed alpha
Helix 54	54	D	177	181	Right-handed 310
Helix 55	55	D	183	187	Right-handed 310
Helix 56	56	D	191	196	Right-handed alpha
Helix 57	57	D	196	204	Right-handed alpha
Helix 58	58	D	205	207	Right-handed 310
Helix 59	59	D	217	221	Right-handed 310
Helix 60	60	D	241	263	Right-handed alpha
Helix 61	61	E	11	28	Right-handed alpha
Helix 62	62	E	43	54	Right-handed alpha
Helix 63	63	E	69	76	Right-handed alpha
Helix 64	64	E	79	87	Right-handed alpha
Helix 65	65	E	88	91	Right-handed 310
Helix 66	66	E	110	116	Right-handed 310
Helix 67	67	E	141	156	Right-handed alpha
Helix 68	68	E	161	170	Right-handed alpha
Helix 69	69	E	177	181	Right-handed 310
Helix 70	70	E	183	187	Right-handed 310
Helix 71	71	E	191	196	Right-handed alpha
Helix 72	72	E	196	204	Right-handed alpha
Helix 73	73	E	205	207	Right-handed 310
Helix 74	74	E	217	221	Right-handed 310
Helix 75	75	E	240	263	Right-handed alpha
Helix 76	76	F	11	28	Right-handed alpha
Helix 77	77	F	43	54	Right-handed alpha
Helix 78	78	F	69	76	Right-handed alpha
Helix 79	79	F	79	87	Right-handed alpha
Helix 80	80	F	88	91	Right-handed 310
Helix 81	81	F	110	116	Right-handed 310
Helix 82	82	F	141	156	Right-handed alpha
Helix 83	83	F	161	170	Right-handed alpha
Helix 84	84	F	177	181	Right-handed 310
Helix 85	85	F	183	187	Right-handed 310
Helix 86	86	F	191	196	Right-handed alpha
Helix 87	87	F	196	204	Right-handed alpha
Helix 88	88	F	205	207	Right-handed 310
Helix 89	89	F	217	221	Right-handed 310
Helix 90	90	F	241	263	Right-handed alpha
Helix 91	91	G	11	28	Right-handed alpha
Helix 92	92	G	43	54	Right-handed alpha
Helix 93	93	G	69	76	Right-handed alpha
Helix 94	94	G	79	87	Right-handed alpha
Helix 95	95	G	88	91	Right-handed 310
Helix 96	96	G	110	116	Right-handed 310
Helix 97	97	G	141	156	Right-handed alpha
Helix 98	98	G	161	170	Right-handed alpha
Helix 99	99	G	177	181	Right-handed 310
Helix 100	100	G	183	187	Right-handed 310
Helix 101	101	G	191	196	Right-handed alpha
Helix 102	102	G	196	204	Right-handed alpha
Helix 103	103	G	205	207	Right-handed 310
Helix 104	104	G	217	221	Right-handed 310
Helix 105	105	G	241	263	Right-handed alpha
Helix 106	106	H	11	28	Right-handed alpha
Helix 107	107	H	43	54	Right-handed alpha
Helix 108	108	H	69	76	Right-handed alpha
Helix 109	109	H	79	87	Right-handed alpha
Helix 110	110	H	88	91	Right-handed 310
Helix 111	111	H	110	116	Right-handed 310
Helix 112	112	H	141	156	Right-handed alpha
Helix 113	113	H	161	170	Right-handed alpha
Helix 114	114	H	177	181	Right-handed 310
Helix 115	115	H	183	187	Right-handed 310
Helix 116	116	H	191	196	Right-handed alpha
Helix 117	117	H	196	204	Right-handed alpha
Helix 118	118	H	205	207	Right-handed 310
Helix 119	119	H	217	221	Right-handed 310
Helix 120	120	H	243	263	Right-handed alpha
Helix 121	121	I	11	28	Right-handed alpha
Helix 122	122	I	43	54	Right-handed alpha
Helix 123	123	I	69	76	Right-handed alpha
Helix 124	124	I	79	87	Right-handed alpha
Helix 125	125	I	88	91	Right-handed 310
Helix 126	126	I	110	116	Right-handed 310
Helix 127	127	I	141	156	Right-handed alpha
Helix 128	128	I	161	170	Right-handed alpha
Helix 129	129	I	177	181	Right-handed 310
Helix 130	130	I	183	187	Right-handed 310
Helix 131	131	I	191	196	Right-handed alpha
Helix 132	132	I	196	204	Right-handed alpha
Helix 133	133	I	205	207	Right-handed 310
Helix 134	134	I	217	221	Right-handed 310
Helix 135	135	I	241	263	Right-handed alpha
Helix 136	136	J	11	28	Right-handed alpha
Helix 137	137	J	43	54	Right-handed alpha
Helix 138	138	J	69	76	Right-handed alpha
Helix 139	139	J	79	87	Right-handed alpha
Helix 140	140	J	88	91	Right-handed 310
Helix 141	141	J	110	116	Right-handed 310
Helix 142	142	J	141	156	Right-handed alpha
Helix 143	143	J	161	170	Right-handed alpha
Helix 144	144	J	177	181	Right-handed 310
Helix 145	145	J	183	187	Right-handed 310
Helix 146	146	J	191	196	Right-handed alpha
Helix 147	147	J	196	204	Right-handed alpha
Helix 148	148	J	205	207	Right-handed 310
Helix 149	149	J	217	221	Right-handed 310
Helix 150	150	J	241	256	Right-handed alpha

There are 28 sheets in PDB entry 1LL0. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	56	59	first strand
Strand 2	A	33	38	parallel
Strand 3	A	3	9	parallel
Strand 4	A	96	100	parallel
Strand 5	A	131	138	anti-parallel
Strand 6	A	120	123	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	104	106	first strand
Strand 2	A	209	211	anti-parallel
Strand 3	A	188	189	parallel

Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	223	224	first strand
Strand 2	A	229	230	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	33	38	first strand
Strand 2	B	3	9	parallel
Strand 3	B	96	100	parallel
Strand 4	B	131	138	anti-parallel
Strand 5	B	120	123	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	104	106	first strand
Strand 2	B	209	211	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	223	224	first strand
Strand 2	B	229	230	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	33	38	first strand
Strand 2	C	3	9	parallel
Strand 3	C	96	100	parallel
Strand 4	C	131	138	anti-parallel
Strand 5	C	120	123	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	104	106	first strand
Strand 2	C	209	211	anti-parallel
Strand 3	C	188	189	parallel

Back to list of sheets
Back to top of page

There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	223	224	first strand
Strand 2	C	229	230	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	56	59	first strand
Strand 2	D	33	38	parallel
Strand 3	D	3	9	parallel
Strand 4	D	96	100	parallel
Strand 5	D	131	138	anti-parallel
Strand 6	D	120	123	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	104	106	first strand
Strand 2	D	209	211	anti-parallel
Strand 3	D	188	189	parallel

Back to list of sheets
Back to top of page

There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	223	224	first strand
Strand 2	D	229	230	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	33	38	first strand
Strand 2	E	3	9	parallel
Strand 3	E	96	100	parallel
Strand 4	E	131	138	anti-parallel
Strand 5	E	120	123	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	104	106	first strand
Strand 2	E	209	211	anti-parallel
Strand 3	E	188	189	parallel

Back to list of sheets
Back to top of page

There are 5 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	33	38	first strand
Strand 2	F	3	9	parallel
Strand 3	F	96	100	parallel
Strand 4	F	131	138	anti-parallel
Strand 5	F	120	123	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	104	106	first strand
Strand 2	F	209	211	anti-parallel
Strand 3	F	188	189	parallel

Back to list of sheets
Back to top of page

There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	223	224	first strand
Strand 2	F	229	230	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	33	38	first strand
Strand 2	G	3	9	parallel
Strand 3	G	96	100	parallel
Strand 4	G	131	138	anti-parallel
Strand 5	G	120	123	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	104	106	first strand
Strand 2	G	209	211	anti-parallel
Strand 3	G	188	189	parallel

Back to list of sheets
Back to top of page

There are 2 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	223	224	first strand
Strand 2	G	229	230	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	33	38	first strand
Strand 2	H	3	9	parallel
Strand 3	H	96	100	parallel
Strand 4	H	131	138	anti-parallel
Strand 5	H	120	123	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	104	106	first strand
Strand 2	H	209	211	anti-parallel
Strand 3	H	188	189	parallel

Back to list of sheets
Back to top of page

There are 5 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	33	38	first strand
Strand 2	I	3	9	parallel
Strand 3	I	96	100	parallel
Strand 4	I	131	138	anti-parallel
Strand 5	I	120	123	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	104	106	first strand
Strand 2	I	209	211	anti-parallel
Strand 3	I	188	189	parallel

Back to list of sheets
Back to top of page

There are 2 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	223	224	first strand
Strand 2	I	229	230	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	33	38	first strand
Strand 2	J	3	9	parallel
Strand 3	J	96	100	parallel
Strand 4	J	131	138	anti-parallel
Strand 5	J	120	123	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	104	106	first strand
Strand 2	J	209	211	anti-parallel
Strand 3	J	188	189	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	223	224	first strand
Strand 2	J	229	230	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 1LL0

Analysis of interatomic Contacts of Structural Units in PDB entry:
1LL0