Analysis of interatomic Contacts of Structural Units in PDB entry:
1LLF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1LLF entry

There are 2 chains in PDB entry 1LLF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1VAL 534
B
 ALA 1001PHE 1133
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 1LLF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
33 37Right-handed 310
Helix 2
2
A
72 84Right-handed alpha
Helix 3
3
A
84 91Right-handed alpha
Helix 4
4
A
129 133Right-handed 310
Helix 5
5
A
135 145Right-handed alpha
Helix 6
6
A
158 164Right-handed alpha
Helix 7
7
A
166 173Right-handed alpha
Helix 8
8
A
176 193Right-handed alpha
Helix 9
9
A
194 196Right-handed 310
Helix 10
10
A
209 221Right-handed alpha
Helix 11
11
A
222 225Right-handed 310
Helix 12
12
A
252 266Right-handed alpha
Helix 13
13
A
273 281Right-handed alpha
Helix 14
14
A
282 292Right-handed alpha
Helix 15
15
A
318 325Right-handed alpha
Helix 16
16
A
342 347Right-handed alpha
Helix 17
17
A
348 350Right-handed 310
Helix 18
18
A
354 366Right-handed alpha
Helix 19
19
A
370 381Right-handed alpha
Helix 20
20
A
384 388Right-handed 310
Helix 21
21
A
402 415Right-handed alpha
Helix 22
22
A
415 426Right-handed alpha
Helix 23
23
A
450 458Right-handed alpha
Helix 24
24
A
463 468Right-handed alpha
Helix 25
25
A
468 478Right-handed alpha
Helix 26
26
A
479 484Right-handed 310
Helix 27
27
A
518 527Right-handed alpha
Helix 28
28
A
528 533Right-handed 310
Helix 29
29
B
1033 1037Right-handed 310
Helix 30
30
B
1072 1084Right-handed alpha
Helix 31
31
B
1084 1091Right-handed alpha
Helix 32
32
B
1129 1133Right-handed 310
Helix 33
33
B
1135 1145Right-handed alpha
Helix 34
34
B
1158 1164Right-handed alpha
Helix 35
35
B
1166 1173Right-handed alpha
Helix 36
36
B
1176 1193Right-handed alpha
Helix 37
37
B
1194 1196Right-handed 310
Helix 38
38
B
1209 1221Right-handed alpha
Helix 39
39
B
1222 1225Right-handed 310
Helix 40
40
B
1252 1266Right-handed alpha
Helix 41
41
B
1273 1281Right-handed alpha
Helix 42
42
B
1282 1292Right-handed alpha
Helix 43
43
B
1318 1325Right-handed alpha
Helix 44
44
B
1342 1347Right-handed alpha
Helix 45
45
B
1348 1350Right-handed 310
Helix 46
46
B
1354 1366Right-handed alpha
Helix 47
47
B
1370 1381Right-handed alpha
Helix 48
48
B
1384 1388Right-handed 310
Helix 49
49
B
1402 1415Right-handed alpha
Helix 50
50
B
1415 1426Right-handed alpha
Helix 51
51
B
1450 1458Right-handed alpha
Helix 52
52
B
1463 1468Right-handed alpha
Helix 53
53
B
1468 1478Right-handed alpha
Helix 54
54
B
1479 1484Right-handed 310
Helix 55
55
B
1518 1527Right-handed alpha
Helix 56
56
B
1528 1533Right-handed 310
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There are 6 sheets in PDB entry 1LLF. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 5first strand
Strand 2
A
11 13anti-parallel
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There are 11 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 16first strand
Strand 2
A
21 27anti-parallel
Strand 3
A
99 104anti-parallel
Strand 4
A
150 154anti-parallel
Strand 5
A
114 120parallel
Strand 6
A
198 208parallel
Strand 7
A
236 240parallel
Strand 8
A
333 338parallel
Strand 9
A
431 436parallel
Strand 10
A
502 506parallel
Strand 11
A
509 513anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
227 228first strand
Strand 2
A
231 232anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1003 1005first strand
Strand 2
B
1011 1013anti-parallel
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There are 11 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1015 1016first strand
Strand 2
B
1021 1027anti-parallel
Strand 3
B
1099 1104anti-parallel
Strand 4
B
1150 1154anti-parallel
Strand 5
B
1114 1120parallel
Strand 6
B
1198 1208parallel
Strand 7
B
1236 1240parallel
Strand 8
B
1333 1338parallel
Strand 9
B
1431 1436parallel
Strand 10
B
1502 1506parallel
Strand 11
B
1509 1513anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1227 1228first strand
Strand 2
B
1231 1232anti-parallel
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