Analysis of interatomic Contacts of Structural Units in PDB entry:
1LLL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1LLL entry

There is 1 chain in PDB entry 1LLL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLN 456
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 1LLL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 7Right-handed 310
Helix 2
2
A
21 37Right-handed alpha
Helix 3
3
A
50 65Right-handed alpha
Helix 4
4
A
76 87Right-handed alpha
Helix 5
5
A
122 133Right-handed alpha
Helix 6
6
A
151 163Right-handed alpha
Helix 7
7
A
185 194Right-handed alpha
Helix 8
8
A
222 225Right-handed 310
Helix 9
9
A
226 237Right-handed alpha
Helix 10
10
A
262 278Right-handed alpha
Helix 11
11
A
290 301Right-handed alpha
Helix 12
12
A
310 322Right-handed alpha
Helix 13
13
A
344 358Right-handed alpha
Helix 14
14
A
364 370Right-handed alpha
Helix 15
15
A
387 397Right-handed alpha
Helix 16
16
A
438 456Right-handed alpha
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There are 5 sheets in PDB entry 1LLL. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
12 15first strand
Strand 2
A
104 110anti-parallel
Strand 3
A
92 95anti-parallel
Strand 4
A
41 45parallel
Strand 5
A
68 74parallel
Strand 6
A
145 148parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
260 261first strand
Strand 2
A
251 255anti-parallel
Strand 3
A
240 244anti-parallel
Strand 4
A
171 176parallel
Strand 5
A
195 196parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
260 261first strand
Strand 2
A
251 255anti-parallel
Strand 3
A
240 244anti-parallel
Strand 4
A
171 176parallel
Strand 5
A
203 205parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
303 306first strand
Strand 2
A
282 285parallel
Strand 3
A
325 327parallel
Strand 4
A
333 335anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
379 381first strand
Strand 2
A
430 436anti-parallel
Strand 3
A
417 423anti-parallel
Strand 4
A
410 414anti-parallel
Strand 5
A
403 405anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il