Analysis of interatomic Contacts of Structural Units in PDB entry:
1LNV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1LNV entry

There is 1 chain in PDB entry 1LNV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 255
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 1LNV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 31Right-handed alpha
Helix 2
2
A
43 45Right-handed 310
Helix 3
3
A
46 55Right-handed alpha
Helix 4
4
A
79 87Right-handed alpha
Helix 5
5
A
95 103Right-handed alpha
Helix 6
6
A
105 120Right-handed alpha
Helix 7
7
A
130 137Right-handed alpha
Helix 8
8
A
138 155Right-handed alpha
Helix 9
9
A
156 160Right-handed 310
Helix 10
10
A
168 172Right-handed 310
Helix 11
11
A
179 198Right-handed alpha
Helix 12
12
A
198 205Right-handed alpha
Helix 13
13
A
214 223Right-handed alpha
Helix 14
14
A
233 237Right-handed 310
Helix 15
15
A
238 255Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1LNV.

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 9first strand
Strand 2
A
37 41parallel
Strand 3
A
60 63parallel
Strand 4
A
90 93parallel
Strand 5
A
122 127parallel
Strand 6
A
163 166parallel
Strand 7
A
206 210parallel
Strand 8
A
229 232parallel
Strand 9
A
5 9parallel
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