Analysis of interatomic Contacts of Structural Units in PDB entry:
1LOX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1LOX entry

There is 1 chain in PDB entry 1LOX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2ILE 663
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 1LOX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
126 139Right-handed alpha
Helix 2
2
A
158 160Right-handed 310
Helix 3
3
A
163 165Right-handed 310
Helix 4
4
A
169 175Right-handed alpha
Helix 5
6
A
201 206Right-handed 310
Helix 6
7
A
214 222Right-handed alpha
Helix 7
8
A
226 235Right-handed alpha
Helix 8
9
A
259 270Right-handed alpha
Helix 9
10
A
280 282Right-handed 310
Helix 10
11
A
338 358Right-handed alpha
Helix 11
12
A
366 379Right-handed alpha
Helix 12
13
A
385 394Right-handed alpha
Helix 13
14
A
397 406Right-handed alpha
Helix 14
15
A
414 418Right-handed alpha
Helix 15
16
A
425 436Right-handed alpha
Helix 16
17
A
440 442Right-handed 310
Helix 17
18
A
444 450Right-handed alpha
Helix 18
19
A
460 482Right-handed alpha
Helix 19
20
A
487 491Right-handed alpha
Helix 20
21
A
494 504Right-handed alpha
Helix 21
22
A
511 514Right-handed 310
Helix 22
23
A
523 536Right-handed alpha
Helix 23
24
A
539 551Right-handed alpha
Helix 24
25
A
555 557Right-handed 310
Helix 25
26
A
574 580Right-handed alpha
Helix 26
27
A
584 596Right-handed alpha
Helix 27
28
A
618 644Right-handed alpha
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There are 5 sheets in PDB entry 1LOX. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 52first strand
Strand 2
A
3 10anti-parallel
Strand 3
A
76 85anti-parallel
Strand 4
A
99 101anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 34first strand
Strand 2
A
21 28anti-parallel
Strand 3
A
60 68anti-parallel
Strand 4
A
106 110anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 83first strand
Strand 2
A
93 96anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
274 278first strand
Strand 2
A
301 306anti-parallel
Strand 3
A
312 318anti-parallel
Strand 4
A
331 333anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
21 24first strand
Strand 2
A
36 40anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il