Analysis of interatomic Contacts of Structural Units in PDB entry:
1LPX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1LPX entry

There is 1 chain in PDB entry 1LPX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 3023ARG 3282
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There is 1 helix in PDB entry 1LPX. Click on helix number for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3173 3175Right-handed 310
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There are 6 sheets in PDB entry 1LPX. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3045 3051first strand
Strand 2
A
3035 3040anti-parallel
Strand 3
A
3028 3032anti-parallel
Strand 4
A
3272 3277anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3056 3061first strand
Strand 2
A
3067 3072anti-parallel
Strand 3
A
3080 3084anti-parallel
Strand 4
A
3088 3094anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3101 3106first strand
Strand 2
A
3112 3117anti-parallel
Strand 3
A
3122 3127anti-parallel
Strand 4
A
3132 3138anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3144 3149first strand
Strand 2
A
3155 3160anti-parallel
Strand 3
A
3166 3171anti-parallel
Strand 4
A
3176 3181anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3188 3193first strand
Strand 2
A
3199 3204anti-parallel
Strand 3
A
3209 3214anti-parallel
Strand 4
A
3219 3225anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3231 3236first strand
Strand 2
A
3240 3245anti-parallel
Strand 3
A
3250 3255anti-parallel
Strand 4
A
3260 3266anti-parallel
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