Analysis of interatomic Contacts of Structural Units in PDB entry:
1LQ1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1LQ1 entry

There are 8 chains in PDB entry 1LQ1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
E
 T 1 G 16
F
 A 115 A 130
G
 T 1 G 16
H
 A 115 A 130
A
 LYS 150HIS 264
B
 ASN 152LEU 262
C
 LYS 151ALA 266
D
 LYS 151HIS 264
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 1LQ1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
152 165Right-handed alpha
Helix 2
2
A
170 186Right-handed alpha
Helix 3
3
A
187 192Right-handed 310
Helix 4
4
A
196 205Right-handed alpha
Helix 5
5
A
208 226Right-handed alpha
Helix 6
6
A
230 236Right-handed alpha
Helix 7
7
A
248 263Right-handed alpha
Helix 8
8
B
152 164Right-handed alpha
Helix 9
9
B
170 180Right-handed alpha
Helix 10
10
B
186 191Right-handed 310
Helix 11
11
B
196 205Right-handed alpha
Helix 12
12
B
208 226Right-handed alpha
Helix 13
13
B
228 236Right-handed alpha
Helix 14
14
B
248 262Right-handed alpha
Helix 15
15
C
152 165Right-handed alpha
Helix 16
16
C
170 186Right-handed alpha
Helix 17
17
C
187 191Right-handed 310
Helix 18
18
C
196 205Right-handed alpha
Helix 19
19
C
208 227Right-handed alpha
Helix 20
20
C
228 234Right-handed alpha
Helix 21
21
C
248 262Right-handed alpha
Helix 22
22
D
152 165Right-handed alpha
Helix 23
23
D
170 186Right-handed alpha
Helix 24
24
D
187 192Right-handed 310
Helix 25
25
D
196 205Right-handed alpha
Helix 26
26
D
208 226Right-handed alpha
Helix 27
27
D
230 235Right-handed alpha
Helix 28
28
D
248 263Right-handed alpha
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There are no sheets in PDB entry 1LQ1
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il