Analysis of interatomic Contacts of Structural Units in PDB entry:
1LRZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1LRZ entry

There is 1 chain in PDB entry 1LRZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 412
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 1LRZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
7 17Right-handed alpha
Helix 2
2
A
26 36Right-handed alpha
Helix 3
3
A
82 99Right-handed alpha
Helix 4
4
A
129 138Right-handed alpha
Helix 5
5
A
167 174Right-handed alpha
Helix 6
6
A
176 188Right-handed alpha
Helix 7
7
A
197 199Right-handed 310
Helix 8
8
A
200 208Right-handed alpha
Helix 9
9
A
221 233Right-handed alpha
Helix 10
10
A
245 273Right-handed alpha
Helix 11
11
A
276 308Right-handed alpha
Helix 12
12
A
334 339Right-handed 310
Helix 13
13
A
340 356Right-handed alpha
Helix 14
14
A
376 385Right-handed alpha
Helix 15
15
A
402 412Right-handed alpha
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There are 4 sheets in PDB entry 1LRZ. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 5first strand
Strand 2
A
39 46anti-parallel
Strand 3
A
52 63anti-parallel
Strand 4
A
67 71anti-parallel
Strand 5
A
102 107parallel
Strand 6
A
397 400anti-parallel
Strand 7
A
141 142anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 5first strand
Strand 2
A
39 46anti-parallel
Strand 3
A
52 63anti-parallel
Strand 4
A
77 78anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
122 125first strand
Strand 2
A
112 116anti-parallel
Strand 3
A
389 393anti-parallel
Strand 4
A
157 162anti-parallel
Strand 5
A
360 365anti-parallel
Strand 6
A
325 332parallel
Strand 7
A
310 320anti-parallel
Strand 8
A
236 237anti-parallel
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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
122 125first strand
Strand 2
A
112 116anti-parallel
Strand 3
A
389 393anti-parallel
Strand 4
A
157 162anti-parallel
Strand 5
A
360 365anti-parallel
Strand 6
A
325 332parallel
Strand 7
A
310 320anti-parallel
Strand 8
A
239 244anti-parallel
Strand 9
A
192 195anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il