Analysis of interatomic Contacts of Structural Units in PDB entry:
1LT8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1LT8 entry

There are 2 chains in PDB entry 1LT8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 11ASP 371
B
 LYS 11ASP 371
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 39 helices in PDB entry 1LT8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 19Right-handed alpha
Helix 2
2
A
28 37Right-handed alpha
Helix 3
3
A
47 52Right-handed alpha
Helix 4
4
A
52 66Right-handed alpha
Helix 5
5
A
96 112Right-handed alpha
Helix 6
6
A
125 130Right-handed alpha
Helix 7
7
A
132 152Right-handed alpha
Helix 8
8
A
163 175Right-handed alpha
Helix 9
9
A
176 178Right-handed 310
Helix 10
10
A
197 207Right-handed alpha
Helix 11
11
A
220 237Right-handed alpha
Helix 12
12
A
260 264Right-handed 310
Helix 13
13
A
271 275Right-handed 310
Helix 14
14
A
277 292Right-handed alpha
Helix 15
15
A
303 314Right-handed alpha
Helix 16
16
A
314 319Right-handed alpha
Helix 17
17
A
322 328Right-handed 310
Helix 18
18
A
332 338Right-handed 310
Helix 19
19
A
340 345Right-handed alpha
Helix 20
20
A
348 355Right-handed alpha
Helix 21
21
B
12 19Right-handed alpha
Helix 22
22
B
28 37Right-handed alpha
Helix 23
23
B
47 52Right-handed alpha
Helix 24
24
B
52 67Right-handed alpha
Helix 25
25
B
102 112Right-handed alpha
Helix 26
26
B
125 130Right-handed alpha
Helix 27
27
B
133 151Right-handed alpha
Helix 28
28
B
163 176Right-handed alpha
Helix 29
29
B
197 207Right-handed alpha
Helix 30
30
B
220 238Right-handed alpha
Helix 31
31
B
260 264Right-handed 310
Helix 32
32
B
271 275Right-handed 310
Helix 33
33
B
277 292Right-handed alpha
Helix 34
34
B
303 314Right-handed alpha
Helix 35
35
B
314 319Right-handed alpha
Helix 36
36
B
322 328Right-handed 310
Helix 37
37
B
329 336Right-handed 310
Helix 38
38
B
340 345Right-handed alpha
Helix 39
39
B
348 353Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 1LT8. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 24first strand
Strand 2
A
293 296parallel
Strand 3
A
243 247parallel
Strand 4
A
212 216parallel
Strand 5
A
181 185parallel
Strand 6
A
155 158parallel
Strand 7
A
117 122parallel
Strand 8
A
70 72parallel
Back to list of sheets
Back to top of page

There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
23 24first strand
Strand 2
B
293 296parallel
Strand 3
B
243 247parallel
Strand 4
B
212 216parallel
Strand 5
B
181 185parallel
Strand 6
B
155 161parallel
Strand 7
B
117 123parallel
Strand 8
B
70 72parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il