Analysis of interatomic Contacts of Structural Units in PDB entry:
1LUC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1LUC entry

There are 2 chains in PDB entry 1LUC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLN 355
B
 MET 1VAL 320
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 1LUC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 34Right-handed alpha
Helix 2
2
A
55 65Right-handed alpha
Helix 3
3
A
78 80Right-handed 310
Helix 4
4
A
83 97Right-handed alpha
Helix 5
5
A
111 117Right-handed alpha
Helix 6
6
A
121 141Right-handed 310
Helix 7
7
A
177 186Right-handed alpha
Helix 8
8
A
198 215Right-handed alpha
Helix 9
9
A
219 221Right-handed 310
Helix 10
10
A
236 259Right-handed alpha
Helix 11
11
A
294 298Right-handed 310
Helix 12
12
A
304 318Right-handed alpha
Helix 13
13
A
328 330Right-handed 310
Helix 14
14
A
333 346Right-handed alpha
Helix 15
15
A
348 350Right-handed 310
Helix 16
16
B
17 33Right-handed alpha
Helix 17
17
B
55 65Right-handed alpha
Helix 18
18
B
83 96Right-handed alpha
Helix 19
19
B
111 116Right-handed alpha
Helix 20
20
B
121 141Right-handed 310
Helix 21
21
B
177 186Right-handed alpha
Helix 22
22
B
198 214Right-handed alpha
Helix 23
23
B
236 254Right-handed alpha
Helix 24
24
B
260 270Right-handed alpha
Helix 25
25
B
276 290Right-handed alpha
Helix 26
26
B
305 317Right-handed alpha
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There are 3 sheets in PDB entry 1LUC. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
189 191first strand
Strand 2
A
169 173parallel
Strand 3
A
101 105parallel
Strand 4
A
70 73parallel
Strand 5
A
38 41parallel
Strand 6
A
2 7parallel
Strand 7
A
322 326parallel
Strand 8
A
226 229parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
189 191first strand
Strand 2
B
170 173parallel
Strand 3
B
101 105parallel
Strand 4
B
70 73parallel
Strand 5
B
38 41parallel
Strand 6
B
2 7parallel
Strand 7
B
294 298parallel
Strand 8
B
225 229parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
230 232first strand
Strand 2
B
272 274parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il