Analysis of interatomic Contacts of Structural Units in PDB entry:
1LUF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1LUF entry

There is 1 chain in PDB entry 1LUF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 560GLU 860
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 1LUF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
561 567Right-handed alpha
Helix 2
2
A
570 574Right-handed 310
Helix 3
3
A
615 631Right-handed alpha
Helix 4
4
A
661 669Right-handed alpha
Helix 5
5
A
697 718Right-handed alpha
Helix 6
6
A
726 728Right-handed 310
Helix 7
7
A
734 736Right-handed 310
Helix 8
8
A
745 750Right-handed alpha
Helix 9
9
A
751 754Right-handed 310
Helix 10
10
A
764 768Right-handed 310
Helix 11
11
A
769 776Right-handed alpha
Helix 12
12
A
779 796Right-handed alpha
Helix 13
13
A
806 816Right-handed alpha
Helix 14
14
A
827 838Right-handed alpha
Helix 15
15
A
841 845Right-handed 310
Helix 16
16
A
847 858Right-handed alpha
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There are 2 sheets in PDB entry 1LUF. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
575 582first strand
Strand 2
A
587 594anti-parallel
Strand 3
A
602 609anti-parallel
Strand 4
A
651 655anti-parallel
Strand 5
A
640 644anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
730 732first strand
Strand 2
A
738 740anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il