Analysis of interatomic Contacts of Structural Units in PDB entry:
1LVL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1LVL entry

There is 1 chain in PDB entry 1LVL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 1ILE 458
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 1LVL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1.1
A
14 27Right-handed alpha
Helix 2
1.2
A
41 67Right-handed alpha
Helix 3
1.3
A
84 107Right-handed alpha
Helix 4
2.4
A
160 165Right-handed alpha
Helix 5
2.5
A
180 194Right-handed alpha
Helix 6
2.6
A
211 224Right-handed alpha
Helix 7
3.7
A
312 327Right-handed alpha
Helix 8
4.8
A
355 359Right-handed alpha
Helix 9
4.9
A
409 422Right-handed alpha
Helix 10
4.1
A
427 432Right-handed alpha
Helix 11
4.1
A
441 450Right-handed alpha
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There are 6 sheets in PDB entry 1LVL. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 115first strand
Strand 2
A
30 34parallel
Strand 3
A
8 12parallel
Strand 4
A
138 141parallel
Strand 5
A
293 295parallel
Strand 6
A
299 303anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
117 121first strand
Strand 2
A
126 130anti-parallel
Strand 3
A
131 135anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
227 231first strand
Strand 2
A
196 201parallel
Strand 3
A
173 178parallel
Strand 4
A
258 263parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
234 239first strand
Strand 2
A
241 246anti-parallel
Strand 3
A
253 257anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
341 344first strand
Strand 2
A
348 351anti-parallel
Strand 3
A
399 407anti-parallel
Strand 4
A
387 393anti-parallel
Strand 5
A
367 373anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
143 147first strand
Strand 2
A
265 268anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il