Analysis of interatomic Contacts of Structural Units in PDB entry:
1LWH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1LWH entry

There are 2 chains in PDB entry 1LWH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1VAL 441
B
 MET 442VAL 882
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 39 helices in PDB entry 1LWH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
7 11Right-handed 310
Helix 2
2
A
21 28Right-handed alpha
Helix 3
3
A
28 35Right-handed alpha
Helix 4
4
A
64 67Right-handed 310
Helix 5
5
A
68 82Right-handed alpha
Helix 6
6
A
99 107Right-handed alpha
Helix 7
7
A
109 114Right-handed alpha
Helix 8
8
A
161 179Right-handed alpha
Helix 9
9
A
187 191Right-handed 310
Helix 10
10
A
194 207Right-handed alpha
Helix 11
11
A
223 231Right-handed alpha
Helix 12
12
A
236 250Right-handed alpha
Helix 13
13
A
252 263Right-handed alpha
Helix 14
14
A
281 288Right-handed 310
Helix 15
15
A
290 302Right-handed alpha
Helix 16
16
A
313 317Right-handed 310
Helix 17
17
A
326 331Right-handed 310
Helix 18
18
A
361 366Right-handed alpha
Helix 19
19
A
371 385Right-handed alpha
Helix 20
20
A
386 392Right-handed 310
Helix 21
21
B
448 453Right-handed alpha
Helix 22
22
B
462 469Right-handed alpha
Helix 23
23
B
469 476Right-handed alpha
Helix 24
24
B
509 523Right-handed alpha
Helix 25
25
B
540 548Right-handed alpha
Helix 26
26
B
550 555Right-handed alpha
Helix 27
27
B
602 619Right-handed alpha
Helix 28
28
B
628 632Right-handed 310
Helix 29
29
B
635 648Right-handed alpha
Helix 30
30
B
664 673Right-handed alpha
Helix 31
31
B
677 691Right-handed alpha
Helix 32
32
B
693 704Right-handed alpha
Helix 33
33
B
722 726Right-handed 310
Helix 34
34
B
731 743Right-handed alpha
Helix 35
35
B
754 758Right-handed 310
Helix 36
36
B
767 772Right-handed 310
Helix 37
37
B
802 808Right-handed alpha
Helix 38
38
B
812 827Right-handed alpha
Helix 39
39
B
828 833Right-handed 310
Back to top of page

There are 10 sheets in PDB entry 1LWH. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 6first strand
Strand 2
A
39 42parallel
Strand 3
A
85 90parallel
Strand 4
A
182 185parallel
Strand 5
A
212 215parallel
Strand 6
A
232 235parallel
Strand 7
A
269 273parallel
Strand 8
A
307 311parallel
Strand 9
A
3 6parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 47first strand
Strand 2
A
58 62anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
137 139first strand
Strand 2
A
145 147anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
393 399first strand
Strand 2
A
403 410anti-parallel
Strand 3
A
413 420anti-parallel
Strand 4
A
438 440anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
427 428first strand
Strand 2
A
431 432anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
653 656first strand
Strand 2
B
623 626parallel
Strand 3
B
526 530parallel
Strand 4
B
480 483parallel
Strand 5
B
444 447parallel
Strand 6
B
748 752parallel
Strand 7
B
710 714parallel
Strand 8
B
674 676parallel
Back to list of sheets
Back to top of page

There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
487 488first strand
Strand 2
B
499 503anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
578 580first strand
Strand 2
B
586 588anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
834 840first strand
Strand 2
B
844 851anti-parallel
Strand 3
B
854 861anti-parallel
Strand 4
B
879 881anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
867 869first strand
Strand 2
B
872 874anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il