Analysis of interatomic Contacts of Structural Units in PDB entry:
1LWJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1LWJ entry

There are 2 chains in PDB entry 1LWJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1VAL 441
B
 MET 442VAL 882
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 1LWJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
7 12Right-handed alpha
Helix 2
2
A
21 28Right-handed alpha
Helix 3
3
A
28 35Right-handed alpha
Helix 4
4
A
68 82Right-handed alpha
Helix 5
5
A
99 107Right-handed alpha
Helix 6
6
A
109 114Right-handed alpha
Helix 7
7
A
161 177Right-handed alpha
Helix 8
8
A
187 191Right-handed 310
Helix 9
9
A
194 206Right-handed alpha
Helix 10
10
A
220 232Right-handed alpha
Helix 11
11
A
236 249Right-handed alpha
Helix 12
12
A
252 263Right-handed alpha
Helix 13
13
A
281 285Right-handed 310
Helix 14
14
A
290 303Right-handed alpha
Helix 15
15
A
326 331Right-handed 310
Helix 16
16
A
361 366Right-handed alpha
Helix 17
17
A
371 386Right-handed alpha
Helix 18
18
A
387 390Right-handed 310
Helix 19
19
B
448 452Right-handed 310
Helix 20
20
B
462 469Right-handed alpha
Helix 21
21
B
469 476Right-handed alpha
Helix 22
22
B
509 523Right-handed alpha
Helix 23
23
B
540 549Right-handed alpha
Helix 24
24
B
550 555Right-handed alpha
Helix 25
25
B
602 619Right-handed alpha
Helix 26
26
B
635 648Right-handed alpha
Helix 27
27
B
661 672Right-handed alpha
Helix 28
28
B
677 690Right-handed alpha
Helix 29
29
B
693 704Right-handed alpha
Helix 30
30
B
722 726Right-handed 310
Helix 31
31
B
731 743Right-handed alpha
Helix 32
32
B
767 771Right-handed 310
Helix 33
33
B
802 807Right-handed alpha
Helix 34
34
B
812 826Right-handed alpha
Helix 35
35
B
827 831Right-handed 310
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There are 9 sheets in PDB entry 1LWJ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 6first strand
Strand 2
A
39 42parallel
Strand 3
A
85 90parallel
Strand 4
A
182 185parallel
Strand 5
A
212 215parallel
Strand 6
A
233 235parallel
Strand 7
A
269 273parallel
Strand 8
A
307 311parallel
Strand 9
A
3 6parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 47first strand
Strand 2
A
58 62anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
137 139first strand
Strand 2
A
145 147anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
393 399first strand
Strand 2
A
403 410anti-parallel
Strand 3
A
413 420anti-parallel
Strand 4
A
438 440anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
426 428first strand
Strand 2
A
431 433anti-parallel
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There are 9 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
444 447first strand
Strand 2
B
480 483parallel
Strand 3
B
526 531parallel
Strand 4
B
623 626parallel
Strand 5
B
653 656parallel
Strand 6
B
673 676parallel
Strand 7
B
710 714parallel
Strand 8
B
748 752parallel
Strand 9
B
444 447parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
578 580first strand
Strand 2
B
586 588anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
834 841first strand
Strand 2
B
844 850anti-parallel
Strand 3
B
855 861anti-parallel
Strand 4
B
879 881anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
867 868first strand
Strand 2
B
873 874anti-parallel
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