Analysis of interatomic Contacts of Structural Units in PDB entry:
1LYX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1LYX entry

There is 1 chain in PDB entry 1LYX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 3MET 248
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 1LYX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 30Right-handed alpha
Helix 2
2
A
44 46Right-handed 310
Helix 3
3
A
47 55Right-handed alpha
Helix 4
4
A
79 86Right-handed alpha
Helix 5
5
A
95 101Right-handed alpha
Helix 6
6
A
105 119Right-handed alpha
Helix 7
7
A
130 136Right-handed alpha
Helix 8
8
A
138 149Right-handed alpha
Helix 9
9
A
150 154Right-handed 310
Helix 10
10
A
166 170Right-handed 310
Helix 11
11
A
177 197Right-handed alpha
Helix 12
12
A
197 204Right-handed alpha
Helix 13
13
A
216 222Right-handed alpha
Helix 14
14
A
232 238Right-handed 310
Helix 15
15
A
239 246Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1LYX.

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 10first strand
Strand 2
A
37 42parallel
Strand 3
A
60 63parallel
Strand 4
A
90 93parallel
Strand 5
A
122 127parallel
Strand 6
A
160 164parallel
Strand 7
A
206 209parallel
Strand 8
A
228 231parallel
Strand 9
A
5 10parallel
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