Analysis of interatomic Contacts of Structural Units in PDB entry:
1LZK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1LZK entry

There is 1 chain in PDB entry 1LZK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2SER 318
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 13 helices in PDB entry 1LZK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 14Right-handed alpha
Helix 2
2
A
25 42Right-handed alpha
Helix 3
3
A
94 97Right-handed 310
Helix 4
4
A
98 110Right-handed alpha
Helix 5
5
A
127 143Right-handed alpha
Helix 6
6
A
143 148Right-handed alpha
Helix 7
7
A
160 177Right-handed alpha
Helix 8
8
A
197 203Right-handed alpha
Helix 9
9
A
210 223Right-handed alpha
Helix 10
10
A
239 243Right-handed 310
Helix 11
11
A
262 276Right-handed alpha
Helix 12
12
A
291 295Right-handed 310
Helix 13
13
A
298 316Right-handed alpha
Back to top of page

There is 1 sheet ( A) in PDB entry 1LZK.

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 56first strand
Strand 2
A
65 72anti-parallel
Strand 3
A
112 116anti-parallel
Strand 4
A
79 85parallel
Strand 5
A
183 187parallel
Strand 6
A
252 257parallel
Strand 7
A
280 285parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il