Analysis of interatomic Contacts of Structural Units in PDB entry:
1M0S


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1M0S entry

There are 2 chains in PDB entry 1M0S (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ASP 219
B
 MET 1ASP 219
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 1M0S. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 15Right-handed alpha
Helix 2
2
A
16 18Right-handed 310
Helix 3
3
A
29 41Right-handed alpha
Helix 4
4
A
42 46Right-handed 310
Helix 5
5
A
53 63Right-handed alpha
Helix 6
6
A
69 73Right-handed 310
Helix 7
7
A
99 109Right-handed alpha
Helix 8
8
A
120 122Right-handed 310
Helix 9
9
A
140 151Right-handed alpha
Helix 10
10
A
179 189Right-handed alpha
Helix 11
11
B
2 15Right-handed alpha
Helix 12
12
B
16 18Right-handed 310
Helix 13
13
B
29 41Right-handed alpha
Helix 14
14
B
42 46Right-handed 310
Helix 15
15
B
53 63Right-handed alpha
Helix 16
16
B
69 73Right-handed 310
Helix 17
17
B
99 109Right-handed alpha
Helix 18
18
B
120 122Right-handed 310
Helix 19
19
B
140 151Right-handed alpha
Helix 20
20
B
179 189Right-handed alpha
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There are 6 sheets in PDB entry 1M0S. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 51first strand
Strand 2
A
23 26parallel
Strand 3
A
76 81parallel
Strand 4
A
110 118parallel
Strand 5
A
206 211parallel
Strand 6
A
214 218anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
85 86first strand
Strand 2
A
92 93anti-parallel
Strand 3
A
198 199anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
154 157first strand
Strand 2
A
168 173anti-parallel
Strand 3
A
132 136anti-parallel
Strand 4
A
193 196anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
67 68first strand
Strand 2
B
48 51parallel
Strand 3
B
23 26parallel
Strand 4
B
76 81parallel
Strand 5
B
110 118parallel
Strand 6
B
206 211parallel
Strand 7
B
214 218anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
85 86first strand
Strand 2
B
92 93anti-parallel
Strand 3
B
198 199anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
154 157first strand
Strand 2
B
168 173anti-parallel
Strand 3
B
132 136anti-parallel
Strand 4
B
193 196anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il