Analysis of interatomic Contacts of Structural Units in PDB entry:
1M0U


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1M0U entry

There are 2 chains in PDB entry 1M0U (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 47VAL 249
B
 LYS 47VAL 249
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 1M0U. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
58 60Right-handed 310
Helix 2
2
A
61 72Right-handed alpha
Helix 3
3
A
84 89Right-handed alpha
Helix 4
4
A
90 96Right-handed 310
Helix 5
5
A
109 122Right-handed alpha
Helix 6
6
A
127 153Right-handed alpha
Helix 7
7
A
156 170Right-handed alpha
Helix 8
8
A
170 186Right-handed alpha
Helix 9
9
A
196 214Right-handed alpha
Helix 10
10
A
221 233Right-handed alpha
Helix 11
11
A
234 244Right-handed alpha
Helix 12
12
B
58 60Right-handed 310
Helix 13
13
B
61 71Right-handed alpha
Helix 14
14
B
84 89Right-handed alpha
Helix 15
15
B
90 96Right-handed 310
Helix 16
16
B
109 121Right-handed alpha
Helix 17
17
B
127 153Right-handed alpha
Helix 18
18
B
159 170Right-handed alpha
Helix 19
19
B
170 186Right-handed alpha
Helix 20
20
B
196 214Right-handed alpha
Helix 21
21
B
221 234Right-handed alpha
Helix 22
22
B
234 244Right-handed alpha
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There are 2 sheets in PDB entry 1M0U. Click on sheet of interest to get list of strands forming it: A, B,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
76 80first strand
Strand 2
A
50 55parallel
Strand 3
A
99 102anti-parallel
Strand 4
A
105 108anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
76 80first strand
Strand 2
B
50 55parallel
Strand 3
B
99 102anti-parallel
Strand 4
B
105 108anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il