Analysis of interatomic Contacts of Structural Units in PDB entry:
1M14


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1M14 entry

There is 1 chain in PDB entry 1M14 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 672GLN 996
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 1M14. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
684 686Right-handed 310
Helix 2
2
A
728 744Right-handed alpha
Helix 3
3
A
773 782Right-handed alpha
Helix 4
4
A
783 785Right-handed 310
Helix 5
5
A
786 807Right-handed alpha
Helix 6
6
A
815 817Right-handed 310
Helix 7
7
A
853 857Right-handed 310
Helix 8
8
A
858 865Right-handed alpha
Helix 9
9
A
868 885Right-handed alpha
Helix 10
10
A
895 897Right-handed 310
Helix 11
11
A
898 906Right-handed alpha
Helix 12
12
A
916 927Right-handed alpha
Helix 13
13
A
930 934Right-handed 310
Helix 14
14
A
936 949Right-handed alpha
Helix 15
15
A
950 954Right-handed 310
Helix 16
16
A
988 992Right-handed 310
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There are 4 sheets in PDB entry 1M14. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
688 695first strand
Strand 2
A
700 707anti-parallel
Strand 3
A
716 723anti-parallel
Strand 4
A
762 767anti-parallel
Strand 5
A
753 758anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
809 810first strand
Strand 2
A
836 837anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
819 823first strand
Strand 2
A
826 829anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
845 846first strand
Strand 2
A
866 867anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il