Analysis of interatomic Contacts of Structural Units in PDB entry:
1M1G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1M1G entry

There are 4 chains in PDB entry 1M1G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 9ILE 248
B
 GLN 7ILE 248
C
 GLN 5ILE 248
D
 GLU 10ILE 248
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 1M1G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
22 38Right-handed alpha
Helix 2
2
A
102 107Right-handed 310
Helix 3
3
A
146 156Right-handed alpha
Helix 4
4
A
173 186Right-handed alpha
Helix 5
5
B
22 32Right-handed alpha
Helix 6
6
B
32 38Right-handed alpha
Helix 7
7
B
39 41Right-handed 310
Helix 8
8
B
102 106Right-handed 310
Helix 9
9
B
146 155Right-handed alpha
Helix 10
10
B
173 182Right-handed alpha
Helix 11
11
B
241 243Right-handed 310
Helix 12
12
C
22 38Right-handed alpha
Helix 13
13
C
39 41Right-handed 310
Helix 14
14
C
103 107Right-handed 310
Helix 15
15
C
146 155Right-handed alpha
Helix 16
16
C
173 185Right-handed alpha
Helix 17
17
D
22 37Right-handed alpha
Helix 18
18
D
39 41Right-handed 310
Helix 19
19
D
102 106Right-handed 310
Helix 20
20
D
146 156Right-handed alpha
Helix 21
21
D
173 187Right-handed alpha
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There are 19 sheets in PDB entry 1M1G. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
159 162first strand
Strand 2
A
12 18anti-parallel
Strand 3
A
171 172anti-parallel
Strand 4
A
12 18anti-parallel
Strand 5
A
138 143anti-parallel
Strand 6
A
43 47anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
116 119first strand
Strand 2
A
124 131anti-parallel
Strand 3
A
51 58anti-parallel
Strand 4
A
62 67anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
73 78first strand
Strand 2
A
83 89anti-parallel
Strand 3
A
92 97anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
164 165first strand
Strand 2
A
168 169anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
245 248first strand
Strand 2
A
200 203anti-parallel
Strand 3
A
212 219anti-parallel
Strand 4
A
224 231anti-parallel
Strand 5
A
234 241anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
159 162first strand
Strand 2
B
12 18anti-parallel
Strand 3
B
171 172anti-parallel
Strand 4
B
12 18anti-parallel
Strand 5
B
138 143anti-parallel
Strand 6
B
43 47anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
116 119first strand
Strand 2
B
124 131anti-parallel
Strand 3
B
51 58anti-parallel
Strand 4
B
62 67anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
73 78first strand
Strand 2
B
83 88anti-parallel
Strand 3
B
93 97anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
164 165first strand
Strand 2
B
168 169anti-parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
245 247first strand
Strand 2
B
200 203anti-parallel
Strand 3
B
212 215anti-parallel
Strand 4
B
225 231anti-parallel
Strand 5
B
234 240anti-parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
159 162first strand
Strand 2
C
12 18anti-parallel
Strand 3
C
138 143anti-parallel
Strand 4
C
43 47anti-parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
116 119first strand
Strand 2
C
124 131anti-parallel
Strand 3
C
51 58anti-parallel
Strand 4
C
62 67anti-parallel
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There are 3 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
73 78first strand
Strand 2
C
83 88anti-parallel
Strand 3
C
93 97anti-parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
164 165first strand
Strand 2
C
168 169anti-parallel
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There are 5 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
245 247first strand
Strand 2
C
200 203anti-parallel
Strand 3
C
212 219anti-parallel
Strand 4
C
224 231anti-parallel
Strand 5
C
234 241anti-parallel
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There are 4 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
159 162first strand
Strand 2
D
12 18anti-parallel
Strand 3
D
138 143anti-parallel
Strand 4
D
43 47anti-parallel
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There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
116 119first strand
Strand 2
D
124 131anti-parallel
Strand 3
D
51 58anti-parallel
Strand 4
D
62 67anti-parallel
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There are 3 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
74 78first strand
Strand 2
D
83 88anti-parallel
Strand 3
D
93 97anti-parallel
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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
164 165first strand
Strand 2
D
168 169anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il