Analysis of interatomic Contacts of Structural Units in PDB entry:
1M37


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1M37 entry

There is 1 chain in PDB entry 1M37 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PRO 378
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 1M37. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1 22Right-handed alpha
Helix 2
2
A
30 45Right-handed alpha
Helix 3
3
A
46 58Right-handed alpha
Helix 4
4
A
59 62Right-handed 310
Helix 5
5
A
64 78Right-handed alpha
Helix 6
6
A
100 112Right-handed alpha
Helix 7
7
A
123 140Right-handed alpha
Helix 8
8
A
175 179Right-handed 310
Helix 9
9
A
240 245Right-handed alpha
Helix 10
10
A
246 255Right-handed alpha
Helix 11
11
A
256 259Right-handed 310
Helix 12
12
A
280 285Right-handed alpha
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There are 4 sheets in PDB entry 1M37. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
114 118first strand
Strand 2
A
84 94parallel
Strand 3
A
158 169anti-parallel
Strand 4
A
324 334anti-parallel
Strand 5
A
313 320anti-parallel
Strand 6
A
271 273anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
114 118first strand
Strand 2
A
84 94parallel
Strand 3
A
158 169anti-parallel
Strand 4
A
324 334anti-parallel
Strand 5
A
313 320anti-parallel
Strand 6
A
276 278anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
260 269first strand
Strand 2
A
191 208anti-parallel
Strand 3
A
180 185anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
260 269first strand
Strand 2
A
191 208anti-parallel
Strand 3
A
213 219anti-parallel
Strand 4
A
225 232anti-parallel
Strand 5
A
350 354anti-parallel
Strand 6
A
359 363anti-parallel
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