Analysis of interatomic Contacts of Structural Units in PDB entry:
1M3G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1M3G entry

There is 1 chain in PDB entry 1M3G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLN 170HIS 314
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 1M3G. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
187 198Right-handed alpha
Helix 2
2
A
235 249Right-handed alpha
Helix 3
3
A
262 275Right-handed alpha
Helix 4
4
A
278 288Right-handed alpha
Helix 5
5
A
304 312Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1M3G.

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
174 176first strand
Strand 2
A
180 182anti-parallel
Strand 3
A
253 255parallel
Strand 4
A
201 204parallel
Strand 5
A
218 221parallel
Strand 6
A
211 213anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il