Analysis of interatomic Contacts of Structural Units in PDB entry:
1M3T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1M3T entry

There is 1 chain in PDB entry 1M3T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 237
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 1M3T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
20 23Right-handed 310
Helix 2
2
A
24 40Right-handed alpha
Helix 3
3
A
61 69Right-handed alpha
Helix 4
4
A
76 81Right-handed alpha
Helix 5
5
A
90 97Right-handed alpha
Helix 6
6
A
104 118Right-handed alpha
Helix 7
7
A
138 146Right-handed alpha
Helix 8
8
A
157 175Right-handed alpha
Helix 9
9
A
192 204Right-handed alpha
Helix 10
10
A
220 224Right-handed 310
Helix 11
11
A
225 229Right-handed 310
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There is 1 sheet ( A) in PDB entry 1M3T.

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 45first strand
Strand 2
A
121 123parallel
Strand 3
A
13 18parallel
Strand 4
A
149 155parallel
Strand 5
A
178 184parallel
Strand 6
A
207 212parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il