Analysis of interatomic Contacts of Structural Units in PDB entry:
1M4R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1M4R entry

There are 2 chains in PDB entry 1M4R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 38ILE 179
B
 HIS 39ILE 179
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 1M4R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
43 48Right-handed 310
Helix 2
2
A
49 65Right-handed alpha
Helix 3
3
A
76 81Right-handed alpha
Helix 4
4
A
87 103Right-handed alpha
Helix 5
5
A
114 130Right-handed alpha
Helix 6
6
A
138 156Right-handed alpha
Helix 7
7
A
156 166Right-handed alpha
Helix 8
8
A
166 179Right-handed alpha
Helix 9
9
B
43 48Right-handed 310
Helix 10
10
B
49 65Right-handed alpha
Helix 11
11
B
76 81Right-handed 310
Helix 12
12
B
87 103Right-handed alpha
Helix 13
13
B
104 108Right-handed 310
Helix 14
14
B
113 129Right-handed alpha
Helix 15
15
B
138 155Right-handed alpha
Helix 16
16
B
156 166Right-handed alpha
Helix 17
17
B
166 179Right-handed alpha
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There are no sheets in PDB entry 1M4R
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il