Analysis of interatomic Contacts of Structural Units in PDB entry:
1M5H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1M5H entry

There are 8 chains in PDB entry 1M5H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PHE 297
B
 MET 1001PHE 1297
C
 MET 2001PHE 2297
D
 MET 3001PHE 3297
E
 MET 4001PHE 4297
F
 MET 5001PHE 5297
G
 MET 6001PHE 6297
H
 MET 7001PHE 7297
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 82 helices in PDB entry 1M5H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
29 42Right-handed alpha
Helix 2
2
A
61 65Right-handed 310
Helix 3
3
A
80 96Right-handed alpha
Helix 4
4
A
116 122Right-handed alpha
Helix 5
5
A
123 126Right-handed 310
Helix 6
6
A
172 189Right-handed alpha
Helix 7
7
A
197 201Right-handed 310
Helix 8
8
A
221 227Right-handed 310
Helix 9
9
A
228 233Right-handed alpha
Helix 10
10
A
253 269Right-handed alpha
Helix 11
11
A
294 296Right-handed 310
Helix 12
12
B
1029 1041Right-handed alpha
Helix 13
13
B
1061 1065Right-handed 310
Helix 14
14
B
1080 1096Right-handed alpha
Helix 15
15
B
1116 1122Right-handed alpha
Helix 16
16
B
1123 1126Right-handed 310
Helix 17
17
B
1172 1188Right-handed alpha
Helix 18
18
B
1197 1201Right-handed 310
Helix 19
19
B
1222 1232Right-handed 310
Helix 20
20
B
1253 1269Right-handed alpha
Helix 21
21
B
1294 1296Right-handed 310
Helix 22
22
C
2029 2042Right-handed alpha
Helix 23
23
C
2061 2065Right-handed 310
Helix 24
24
C
2080 2096Right-handed alpha
Helix 25
25
C
2116 2122Right-handed alpha
Helix 26
26
C
2123 2126Right-handed 310
Helix 27
27
C
2172 2188Right-handed alpha
Helix 28
28
C
2197 2201Right-handed 310
Helix 29
29
C
2221 2229Right-handed 310
Helix 30
30
C
2253 2269Right-handed alpha
Helix 31
31
C
2294 2296Right-handed 310
Helix 32
32
D
3029 3042Right-handed alpha
Helix 33
33
D
3061 3065Right-handed 310
Helix 34
34
D
3080 3096Right-handed alpha
Helix 35
35
D
3116 3122Right-handed alpha
Helix 36
36
D
3123 3126Right-handed 310
Helix 37
37
D
3172 3189Right-handed alpha
Helix 38
38
D
3197 3201Right-handed 310
Helix 39
39
D
3221 3229Right-handed 310
Helix 40
40
D
3253 3269Right-handed alpha
Helix 41
41
D
3283 3287Right-handed 310
Helix 42
42
D
3294 3296Right-handed 310
Helix 43
43
E
4029 4042Right-handed alpha
Helix 44
44
E
4061 4065Right-handed 310
Helix 45
45
E
4080 4096Right-handed alpha
Helix 46
46
E
4117 4122Right-handed alpha
Helix 47
47
E
4123 4126Right-handed 310
Helix 48
48
E
4172 4189Right-handed alpha
Helix 49
49
E
4197 4201Right-handed 310
Helix 50
50
E
4221 4227Right-handed 310
Helix 51
51
E
4228 4233Right-handed alpha
Helix 52
52
E
4253 4269Right-handed alpha
Helix 53
53
E
4294 4296Right-handed 310
Helix 54
54
F
5029 5042Right-handed alpha
Helix 55
55
F
5061 5065Right-handed 310
Helix 56
56
F
5080 5096Right-handed alpha
Helix 57
57
F
5116 5122Right-handed alpha
Helix 58
58
F
5123 5126Right-handed 310
Helix 59
59
F
5172 5189Right-handed alpha
Helix 60
60
F
5197 5201Right-handed 310
Helix 61
61
F
5221 5232Right-handed 310
Helix 62
62
F
5253 5269Right-handed alpha
Helix 63
63
F
5294 5296Right-handed 310
Helix 64
64
G
6029 6041Right-handed alpha
Helix 65
65
G
6080 6096Right-handed alpha
Helix 66
66
G
6116 6122Right-handed alpha
Helix 67
67
G
6123 6126Right-handed 310
Helix 68
68
G
6172 6189Right-handed alpha
Helix 69
69
G
6197 6201Right-handed 310
Helix 70
70
G
6221 6232Right-handed 310
Helix 71
71
G
6253 6269Right-handed alpha
Helix 72
72
G
6294 6297Right-handed 310
Helix 73
73
H
7029 7042Right-handed alpha
Helix 74
74
H
7061 7065Right-handed 310
Helix 75
75
H
7080 7096Right-handed alpha
Helix 76
76
H
7116 7122Right-handed alpha
Helix 77
77
H
7123 7126Right-handed 310
Helix 78
78
H
7172 7189Right-handed alpha
Helix 79
79
H
7197 7201Right-handed 310
Helix 80
80
H
7221 7229Right-handed 310
Helix 81
81
H
7253 7269Right-handed alpha
Helix 82
82
H
7294 7296Right-handed 310
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There are no sheets in PDB entry 1M5H
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