Analysis of interatomic Contacts of Structural Units in PDB entry:
1M6N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1M6N entry

There is 1 chain in PDB entry 1M6N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 802
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 1M6N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 8Right-handed 310
Helix 2
2
A
9 29Right-handed alpha
Helix 3
3
A
30 35Right-handed alpha
Helix 4
4
A
37 54Right-handed alpha
Helix 5
5
A
57 78Right-handed alpha
Helix 6
6
A
82 95Right-handed alpha
Helix 7
7
A
105 119Right-handed alpha
Helix 8
8
A
130 148Right-handed alpha
Helix 9
9
A
160 170Right-handed alpha
Helix 10
10
A
177 188Right-handed alpha
Helix 11
11
A
192 196Right-handed 310
Helix 12
12
A
208 214Right-handed alpha
Helix 13
13
A
215 218Right-handed 310
Helix 14
14
A
230 242Right-handed alpha
Helix 15
15
A
263 268Right-handed alpha
Helix 16
16
A
269 273Right-handed 310
Helix 17
17
A
281 299Right-handed alpha
Helix 18
18
A
301 305Right-handed alpha
Helix 19
19
A
329 331Right-handed 310
Helix 20
20
A
332 341Right-handed alpha
Helix 21
21
A
356 362Right-handed alpha
Helix 22
22
A
374 376Right-handed 310
Helix 23
23
A
377 386Right-handed alpha
Helix 24
24
A
410 427Right-handed alpha
Helix 25
25
A
438 452Right-handed alpha
Helix 26
26
A
463 473Right-handed alpha
Helix 27
27
A
474 476Right-handed 310
Helix 28
28
A
498 503Right-handed 310
Helix 29
29
A
515 525Right-handed alpha
Helix 30
30
A
551 561Right-handed alpha
Helix 31
31
A
571 619Right-handed alpha
Helix 32
32
A
623 642Right-handed alpha
Helix 33
33
A
648 652Right-handed 310
Helix 34
34
A
655 665Right-handed alpha
Helix 35
35
A
680 703Right-handed alpha
Helix 36
36
A
706 735Right-handed alpha
Helix 37
37
A
747 778Right-handed alpha
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There are 5 sheets in PDB entry 1M6N. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
152 154first strand
Strand 2
A
172 176parallel
Strand 3
A
124 128parallel
Strand 4
A
203 207parallel
Strand 5
A
366 371parallel
Strand 6
A
97 99parallel
Strand 7
A
389 391parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
349 355first strand
Strand 2
A
221 226anti-parallel
Strand 3
A
794 797anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
306 307first strand
Strand 2
A
314 315anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
406 408first strand
Strand 2
A
534 540parallel
Strand 3
A
401 402parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
406 408first strand
Strand 2
A
534 540parallel
Strand 3
A
507 509parallel
Strand 4
A
432 436parallel
Strand 5
A
480 484parallel
Strand 6
A
457 459parallel
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