Analysis of interatomic Contacts of Structural Units in PDB entry:
1M7H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1M7H entry

There are 4 chains in PDB entry 1M7H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 7LYS 209
B
 THR 6GLU 211
C
 THR 6LYS 209
D
 THR 6LYS 209
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 1M7H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 22Right-handed alpha
Helix 2
2
A
37 51Right-handed alpha
Helix 3
3
A
61 66Right-handed alpha
Helix 4
4
A
76 97Right-handed alpha
Helix 5
5
A
109 122Right-handed alpha
Helix 6
6
A
141 149Right-handed alpha
Helix 7
7
A
152 158Right-handed alpha
Helix 8
8
A
188 203Right-handed alpha
Helix 9
9
B
13 22Right-handed alpha
Helix 10
10
B
37 52Right-handed alpha
Helix 11
11
B
61 67Right-handed alpha
Helix 12
12
B
76 97Right-handed alpha
Helix 13
13
B
109 122Right-handed alpha
Helix 14
14
B
141 149Right-handed alpha
Helix 15
15
B
152 159Right-handed alpha
Helix 16
16
B
188 203Right-handed alpha
Helix 17
17
C
13 22Right-handed alpha
Helix 18
18
C
37 51Right-handed alpha
Helix 19
19
C
62 66Right-handed alpha
Helix 20
20
C
76 97Right-handed alpha
Helix 21
21
C
109 122Right-handed alpha
Helix 22
22
C
141 149Right-handed alpha
Helix 23
23
C
152 159Right-handed alpha
Helix 24
24
C
188 203Right-handed alpha
Helix 25
25
D
13 22Right-handed alpha
Helix 26
26
D
37 51Right-handed alpha
Helix 27
27
D
61 67Right-handed alpha
Helix 28
28
D
76 97Right-handed alpha
Helix 29
29
D
109 122Right-handed alpha
Helix 30
30
D
141 149Right-handed alpha
Helix 31
31
D
152 159Right-handed alpha
Helix 32
32
D
188 203Right-handed alpha
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There are 4 sheets in PDB entry 1M7H. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 60first strand
Strand 2
A
100 104parallel
Strand 3
A
26 31parallel
Strand 4
A
133 139parallel
Strand 5
A
180 183parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
57 60first strand
Strand 2
B
100 104parallel
Strand 3
B
26 31parallel
Strand 4
B
133 139parallel
Strand 5
B
180 183parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
57 61first strand
Strand 2
C
100 104parallel
Strand 3
C
26 31parallel
Strand 4
C
133 139parallel
Strand 5
C
180 183parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
57 60first strand
Strand 2
D
100 104parallel
Strand 3
D
26 31parallel
Strand 4
D
133 139parallel
Strand 5
D
180 183parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il