Analysis of interatomic Contacts of Structural Units in PDB entry:
1M7W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1M7W entry

There are 4 chains in PDB entry 1M7W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 142GLY 367
B
 LEU 140GLY 367
C
 LEU 140GLY 367
D
 SER 139GLY 367
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 1M7W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
142 156Right-handed alpha
Helix 2
2
A
174 195Right-handed alpha
Helix 3
3
A
196 201Right-handed alpha
Helix 4
4
A
203 214Right-handed alpha
Helix 5
5
A
214 226Right-handed alpha
Helix 6
6
A
246 250Right-handed 310
Helix 7
7
A
251 251Right-handed 310
Helix 8
8
A
252 263Right-handed alpha
Helix 9
9
A
263 271Right-handed alpha
Helix 10
10
A
273 286Right-handed alpha
Helix 11
11
A
295 316Right-handed alpha
Helix 12
12
A
323 330Right-handed alpha
Helix 13
13
A
331 352Right-handed alpha
Helix 14
14
A
358 365Right-handed alpha
Helix 15
15
B
143 155Right-handed alpha
Helix 16
16
B
174 195Right-handed alpha
Helix 17
17
B
196 201Right-handed alpha
Helix 18
18
B
203 214Right-handed alpha
Helix 19
19
B
214 228Right-handed alpha
Helix 20
20
B
246 250Right-handed 310
Helix 21
21
B
253 263Right-handed alpha
Helix 22
22
B
263 271Right-handed alpha
Helix 23
23
B
273 286Right-handed alpha
Helix 24
24
B
295 317Right-handed alpha
Helix 25
25
B
323 330Right-handed alpha
Helix 26
26
B
331 366Right-handed alpha
Helix 27
27
C
142 155Right-handed alpha
Helix 28
28
C
174 194Right-handed alpha
Helix 29
29
C
196 201Right-handed alpha
Helix 30
30
C
203 214Right-handed alpha
Helix 31
31
C
214 228Right-handed alpha
Helix 32
32
C
252 263Right-handed alpha
Helix 33
33
C
263 271Right-handed alpha
Helix 34
34
C
273 286Right-handed alpha
Helix 35
35
C
295 316Right-handed alpha
Helix 36
36
C
323 330Right-handed alpha
Helix 37
37
C
331 344Right-handed alpha
Helix 38
38
C
345 353Right-handed alpha
Helix 39
39
C
354 359Right-handed alpha
Helix 40
40
C
359 364Right-handed alpha
Helix 41
41
D
142 156Right-handed alpha
Helix 42
42
D
174 195Right-handed alpha
Helix 43
43
D
196 201Right-handed alpha
Helix 44
44
D
203 214Right-handed alpha
Helix 45
45
D
214 228Right-handed alpha
Helix 46
46
D
252 263Right-handed alpha
Helix 47
47
D
263 271Right-handed alpha
Helix 48
48
D
273 286Right-handed alpha
Helix 49
49
D
295 317Right-handed alpha
Helix 50
50
D
323 330Right-handed alpha
Helix 51
51
D
330 352Right-handed alpha
Helix 52
52
D
358 366Right-handed alpha
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There are 4 sheets in PDB entry 1M7W. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
233 235first strand
Strand 2
A
241 243anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
233 235first strand
Strand 2
B
241 243anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
233 235first strand
Strand 2
C
241 243anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
233 235first strand
Strand 2
D
241 243anti-parallel
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