Analysis of interatomic Contacts of Structural Units in PDB entry:
1M9L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1M9L entry

There is 1 chain in PDB entry 1M9L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 198
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 1M9L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 17Right-handed alpha
Helix 2
2
A
40 47Right-handed alpha
Helix 3
3
A
48 50Right-handed 310
Helix 4
4
A
65 70Right-handed alpha
Helix 5
5
A
87 95Right-handed alpha
Helix 6
6
A
107 117Right-handed alpha
Helix 7
7
A
129 137Right-handed alpha
Helix 8
8
A
150 157Right-handed alpha
Helix 9
9
A
161 173Right-handed alpha
Helix 10
10
A
181 185Right-handed 310
Helix 11
11
A
190 197Right-handed alpha
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There are 2 sheets in PDB entry 1M9L. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 29first strand
Strand 2
A
52 54parallel
Strand 3
A
74 76parallel
Strand 4
A
97 99parallel
Strand 5
A
119 122parallel
Strand 6
A
144 147parallel
Strand 7
A
178 179parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 60first strand
Strand 2
A
79 82parallel
Strand 3
A
102 104parallel
Strand 4
A
124 126parallel
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