Analysis of interatomic Contacts of Structural Units in PDB entry:
1MC0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1MC0 entry

There is 1 chain in PDB entry 1MC0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 215TYR 555
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 1MC0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
215 228Right-handed alpha
Helix 2
2
A
233 249Right-handed alpha
Helix 3
3
A
288 296Right-handed alpha
Helix 4
4
A
302 304Right-handed 310
Helix 5
5
A
305 317Right-handed alpha
Helix 6
6
A
353 399Right-handed alpha
Helix 7
7
A
405 419Right-handed alpha
Helix 8
8
A
456 466Right-handed alpha
Helix 9
9
A
484 489Right-handed alpha
Helix 10
10
A
523 553Right-handed alpha
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There are 3 sheets in PDB entry 1MC0. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
274 283first strand
Strand 2
A
265 271anti-parallel
Strand 3
A
251 259anti-parallel
Strand 4
A
336 345anti-parallel
Strand 5
A
323 329anti-parallel
Strand 6
A
299 300anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
469 471first strand
Strand 2
A
495 501anti-parallel
Strand 3
A
507 516anti-parallel
Strand 4
A
420 428anti-parallel
Strand 5
A
433 438anti-parallel
Strand 6
A
441 442anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
469 471first strand
Strand 2
A
495 501anti-parallel
Strand 3
A
507 516anti-parallel
Strand 4
A
420 428anti-parallel
Strand 5
A
433 438anti-parallel
Strand 6
A
451 452anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il