Analysis of interatomic Contacts of Structural Units in PDB entry:
1ME5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1ME5 entry

There are 3 chains in PDB entry 1ME5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 3SER 175
B
 ILE 3SER 175
C
 ILE 3ILE 171
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 1ME5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 8Right-handed alpha
Helix 2
2
A
14 26Right-handed alpha
Helix 3
3
A
32 47Right-handed alpha
Helix 4
4
A
48 60Right-handed alpha
Helix 5
5
A
64 91Right-handed alpha
Helix 6
6
A
113 129Right-handed alpha
Helix 7
7
A
130 144Right-handed alpha
Helix 8
8
A
147 174Right-handed alpha
Helix 9
9
B
3 8Right-handed alpha
Helix 10
10
B
11 13Right-handed 310
Helix 11
11
B
14 27Right-handed alpha
Helix 12
12
B
36 47Right-handed alpha
Helix 13
13
B
48 58Right-handed alpha
Helix 14
14
B
65 89Right-handed alpha
Helix 15
15
B
104 108Right-handed 310
Helix 16
16
B
115 129Right-handed alpha
Helix 17
17
B
130 142Right-handed alpha
Helix 18
18
B
148 175Right-handed alpha
Helix 19
19
C
3 10Right-handed alpha
Helix 20
20
C
11 13Right-handed 310
Helix 21
21
C
14 25Right-handed alpha
Helix 22
22
C
31 47Right-handed alpha
Helix 23
23
C
48 59Right-handed alpha
Helix 24
24
C
64 90Right-handed alpha
Helix 25
25
C
104 109Right-handed 310
Helix 26
26
C
113 129Right-handed alpha
Helix 27
27
C
130 145Right-handed alpha
Helix 28
28
C
147 169Right-handed alpha
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There are no sheets in PDB entry 1ME5
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il