Analysis of interatomic Contacts of Structural Units in PDB entry:
1MG5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1MG5 entry

There are 2 chains in PDB entry 1MG5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1ILE 255
B
 SER 1ILE 255
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 1MG5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 27Right-handed alpha
Helix 2
2
A
42 53Right-handed alpha
Helix 3
3
A
68 84Right-handed alpha
Helix 4
4
A
100 109Right-handed alpha
Helix 5
5
A
109 124Right-handed alpha
Helix 6
6
A
125 128Right-handed 310
Helix 7
7
A
139 143Right-handed 310
Helix 8
8
A
149 174Right-handed alpha
Helix 9
9
A
195 199Right-handed 310
Helix 10
10
A
202 209Right-handed alpha
Helix 11
11
A
215 229Right-handed alpha
Helix 12
12
B
16 27Right-handed alpha
Helix 13
13
B
42 53Right-handed alpha
Helix 14
14
B
68 84Right-handed alpha
Helix 15
15
B
100 109Right-handed alpha
Helix 16
16
B
109 124Right-handed alpha
Helix 17
17
B
125 128Right-handed 310
Helix 18
18
B
139 143Right-handed 310
Helix 19
19
B
149 169Right-handed alpha
Helix 20
20
B
169 174Right-handed alpha
Helix 21
21
B
187 192Right-handed alpha
Helix 22
22
B
195 199Right-handed 310
Helix 23
23
B
202 209Right-handed alpha
Helix 24
24
B
215 229Right-handed alpha
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There are 4 sheets in PDB entry 1MG5. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 62first strand
Strand 2
A
33 38parallel
Strand 3
A
8 12parallel
Strand 4
A
88 91parallel
Strand 5
A
132 137parallel
Strand 6
A
175 182parallel
Strand 7
A
234 238parallel
Strand 8
A
241 244anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 186first strand
Strand 2
A
213 214parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
57 62first strand
Strand 2
B
33 38parallel
Strand 3
B
8 12parallel
Strand 4
B
88 91parallel
Strand 5
B
132 137parallel
Strand 6
B
175 182parallel
Strand 7
B
234 238parallel
Strand 8
B
241 244anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
185 186first strand
Strand 2
B
213 214parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il