Analysis of interatomic Contacts of Structural Units in PDB entry:
1MH6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1MH6 entry

There are 2 chains in PDB entry 1MH6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 202SER 326
B
 THR 2SER 126
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 8 helices in PDB entry 1MH6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
215 222Right-handed alpha
Helix 2
2
A
223 225Right-handed 310
Helix 3
3
A
268 280Right-handed alpha
Helix 4
4
A
320 325Right-handed alpha
Helix 5
5
B
15 22Right-handed alpha
Helix 6
6
B
23 25Right-handed 310
Helix 7
7
B
68 80Right-handed alpha
Helix 8
8
B
120 125Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 1MH6. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
204 207first strand
Strand 2
B
61 66anti-parallel
Strand 3
B
113 118parallel
Strand 4
B
102 107anti-parallel
Strand 5
B
90 96anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
210 211first strand
Strand 2
A
243 249parallel
Strand 3
A
235 240anti-parallel
Strand 4
A
227 231anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
290 296first strand
Strand 2
A
302 307anti-parallel
Strand 3
A
313 318anti-parallel
Strand 4
A
261 266parallel
Strand 5
B
4 7anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 11first strand
Strand 2
B
43 49parallel
Strand 3
B
35 40anti-parallel
Strand 4
B
27 31anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il