Analysis of interatomic Contacts of Structural Units in PDB entry:
1MI1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1MI1 entry

There are 2 chains in PDB entry 1MI1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2140ARG 2553
B
 GLY 2140ARG 2553
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 45 helices in PDB entry 1MI1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2176 2181Right-handed alpha
Helix 2
2
A
2183 2190Right-handed alpha
Helix 3
3
A
2233 2243Right-handed alpha
Helix 4
4
A
2258 2264Right-handed alpha
Helix 5
5
A
2265 2272Right-handed alpha
Helix 6
6
A
2274 2281Right-handed alpha
Helix 7
7
A
2285 2297Right-handed alpha
Helix 8
8
A
2303 2307Right-handed 310
Helix 9
9
A
2326 2330Right-handed 310
Helix 10
10
A
2336 2340Right-handed 310
Helix 11
11
A
2341 2354Right-handed alpha
Helix 12
12
A
2371 2379Right-handed alpha
Helix 13
13
A
2384 2392Right-handed alpha
Helix 14
14
A
2406 2417Right-handed alpha
Helix 15
15
A
2425 2430Right-handed 310
Helix 16
16
A
2431 2436Right-handed 310
Helix 17
17
A
2463 2476Right-handed alpha
Helix 18
18
A
2477 2482Right-handed alpha
Helix 19
19
A
2483 2492Right-handed alpha
Helix 20
20
A
2498 2504Right-handed alpha
Helix 21
21
A
2524 2539Right-handed alpha
Helix 22
22
B
2176 2182Right-handed alpha
Helix 23
23
B
2183 2189Right-handed alpha
Helix 24
24
B
2233 2242Right-handed alpha
Helix 25
25
B
2258 2264Right-handed alpha
Helix 26
26
B
2265 2273Right-handed alpha
Helix 27
27
B
2274 2281Right-handed alpha
Helix 28
28
B
2285 2298Right-handed alpha
Helix 29
29
B
2303 2307Right-handed 310
Helix 30
30
B
2326 2330Right-handed 310
Helix 31
31
B
2336 2340Right-handed 310
Helix 32
32
B
2341 2354Right-handed alpha
Helix 33
33
B
2371 2379Right-handed alpha
Helix 34
34
B
2384 2393Right-handed alpha
Helix 35
35
B
2399 2403Right-handed 310
Helix 36
36
B
2406 2417Right-handed alpha
Helix 37
37
B
2425 2430Right-handed 310
Helix 38
38
B
2431 2436Right-handed 310
Helix 39
39
B
2463 2477Right-handed alpha
Helix 40
40
B
2477 2482Right-handed alpha
Helix 41
41
B
2483 2492Right-handed alpha
Helix 42
42
B
2493 2497Right-handed 310
Helix 43
43
B
2498 2504Right-handed alpha
Helix 44
44
B
2509 2513Right-handed 310
Helix 45
45
B
2524 2539Right-handed alpha
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There are 2 sheets in PDB entry 1MI1. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2196 2198first strand
Strand 2
A
2167 2172anti-parallel
Strand 3
A
2155 2163anti-parallel
Strand 4
A
2144 2152anti-parallel
Strand 5
A
2226 2230anti-parallel
Strand 6
A
2213 2221anti-parallel
Strand 7
A
2202 2210anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2194 2198first strand
Strand 2
B
2167 2172anti-parallel
Strand 3
B
2155 2163anti-parallel
Strand 4
B
2144 2152anti-parallel
Strand 5
B
2226 2230anti-parallel
Strand 6
B
2213 2221anti-parallel
Strand 7
B
2202 2210anti-parallel
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